Author: bugman
Date: Wed Apr 9 18:35:41 2014
New Revision: 22670
URL: http://svn.gna.org/viewcvs/relax?rev=22670&view=rev
Log:
Standardised all of the parameter list objects for the specific analyses.
All of the specific_analyses packages now contain a parameter_object module
which defines all of the
parameters. The ordering of these is now consistent between the analyses,
the result of which will
be more consistent ordering of element in the relax XML state files.
The new Param_list.add_csa() base class method has been added to standardise
the CSA parameter. And
the capabilities of the add_model_info() method has been expanded.
Added:
trunk/specific_analyses/consistency_tests/parameter_object.py
- copied, changed from r22668,
trunk/specific_analyses/consistency_tests/api.py
trunk/specific_analyses/frame_order/parameter_object.py
- copied, changed from r22668,
trunk/specific_analyses/frame_order/api.py
trunk/specific_analyses/jw_mapping/parameter_object.py
- copied, changed from r22668, trunk/specific_analyses/jw_mapping/api.py
trunk/specific_analyses/model_free/parameter_object.py
- copied, changed from r22669, trunk/specific_analyses/model_free/api.py
trunk/specific_analyses/n_state_model/parameter_object.py
- copied, changed from r22662,
trunk/specific_analyses/n_state_model/api.py
trunk/specific_analyses/noe/parameter_object.py
- copied, changed from r22662, trunk/specific_analyses/noe/api.py
trunk/specific_analyses/relax_fit/parameter_object.py
- copied, changed from r22668, trunk/specific_analyses/relax_fit/api.py
Modified:
trunk/specific_analyses/consistency_tests/__init__.py
trunk/specific_analyses/consistency_tests/api.py
trunk/specific_analyses/frame_order/__init__.py
trunk/specific_analyses/jw_mapping/__init__.py
trunk/specific_analyses/jw_mapping/api.py
trunk/specific_analyses/model_free/__init__.py
trunk/specific_analyses/model_free/api.py
trunk/specific_analyses/n_state_model/__init__.py
trunk/specific_analyses/n_state_model/api.py
trunk/specific_analyses/noe/__init__.py
trunk/specific_analyses/noe/api.py
trunk/specific_analyses/parameter_object.py
trunk/specific_analyses/relax_disp/__init__.py
trunk/specific_analyses/relax_disp/parameter_object.py
trunk/specific_analyses/relax_fit/__init__.py
trunk/specific_analyses/relax_fit/api.py
trunk/test_suite/shared_data/model_free/OMP/final_results_trunc2_3.0_oldxml.bz2
[This mail would be too long, it was shortened to contain the URLs only.]
Modified: trunk/specific_analyses/consistency_tests/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/consistency_tests/__init__.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/consistency_tests/api.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/consistency_tests/api.py?rev=22670&r1=22669&r2=22670&view=diff
Copied: trunk/specific_analyses/consistency_tests/parameter_object.py (from
r22668, trunk/specific_analyses/consistency_tests/api.py)
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/consistency_tests/parameter_object.py?p2=trunk/specific_analyses/consistency_tests/parameter_object.py&p1=trunk/specific_analyses/consistency_tests/api.py&r1=22668&r2=22670&rev=22670&view=diff
Modified: trunk/specific_analyses/frame_order/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/frame_order/__init__.py?rev=22670&r1=22669&r2=22670&view=diff
Copied: trunk/specific_analyses/frame_order/parameter_object.py (from r22668,
trunk/specific_analyses/frame_order/api.py)
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/frame_order/parameter_object.py?p2=trunk/specific_analyses/frame_order/parameter_object.py&p1=trunk/specific_analyses/frame_order/api.py&r1=22668&r2=22670&rev=22670&view=diff
Modified: trunk/specific_analyses/jw_mapping/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/jw_mapping/__init__.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/jw_mapping/api.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/jw_mapping/api.py?rev=22670&r1=22669&r2=22670&view=diff
Copied: trunk/specific_analyses/jw_mapping/parameter_object.py (from r22668,
trunk/specific_analyses/jw_mapping/api.py)
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/jw_mapping/parameter_object.py?p2=trunk/specific_analyses/jw_mapping/parameter_object.py&p1=trunk/specific_analyses/jw_mapping/api.py&r1=22668&r2=22670&rev=22670&view=diff
Modified: trunk/specific_analyses/model_free/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/model_free/__init__.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/model_free/api.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/model_free/api.py?rev=22670&r1=22669&r2=22670&view=diff
Copied: trunk/specific_analyses/model_free/parameter_object.py (from r22669,
trunk/specific_analyses/model_free/api.py)
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/model_free/parameter_object.py?p2=trunk/specific_analyses/model_free/parameter_object.py&p1=trunk/specific_analyses/model_free/api.py&r1=22669&r2=22670&rev=22670&view=diff
Modified: trunk/specific_analyses/n_state_model/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/n_state_model/__init__.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/n_state_model/api.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/n_state_model/api.py?rev=22670&r1=22669&r2=22670&view=diff
Copied: trunk/specific_analyses/n_state_model/parameter_object.py (from
r22662, trunk/specific_analyses/n_state_model/api.py)
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/n_state_model/parameter_object.py?p2=trunk/specific_analyses/n_state_model/parameter_object.py&p1=trunk/specific_analyses/n_state_model/api.py&r1=22662&r2=22670&rev=22670&view=diff
Modified: trunk/specific_analyses/noe/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/noe/__init__.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/noe/api.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/noe/api.py?rev=22670&r1=22669&r2=22670&view=diff
Copied: trunk/specific_analyses/noe/parameter_object.py (from r22662,
trunk/specific_analyses/noe/api.py)
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/noe/parameter_object.py?p2=trunk/specific_analyses/noe/parameter_object.py&p1=trunk/specific_analyses/noe/api.py&r1=22662&r2=22670&rev=22670&view=diff
Modified: trunk/specific_analyses/parameter_object.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/parameter_object.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/relax_disp/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/relax_disp/__init__.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/relax_disp/parameter_object.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/relax_disp/parameter_object.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/relax_fit/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/relax_fit/__init__.py?rev=22670&r1=22669&r2=22670&view=diff
Modified: trunk/specific_analyses/relax_fit/api.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/relax_fit/api.py?rev=22670&r1=22669&r2=22670&view=diff
Copied: trunk/specific_analyses/relax_fit/parameter_object.py (from r22668,
trunk/specific_analyses/relax_fit/api.py)
URL:
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/relax_fit/parameter_object.py?p2=trunk/specific_analyses/relax_fit/parameter_object.py&p1=trunk/specific_analyses/relax_fit/api.py&r1=22668&r2=22670&rev=22670&view=diff
Modified:
trunk/test_suite/shared_data/model_free/OMP/final_results_trunc2_3.0_oldxml.bz2
URL:
http://svn.gna.org/viewcvs/relax/trunk/test_suite/shared_data/model_free/OMP/final_results_trunc2_3.0_oldxml.bz2?rev=22670&r1=22669&r2=22670&view=diff
r22670 - in /trunk: specific_analyses/ specific_analyses/consistency_tests/ specific_analyses/frame_order/ specific_analyses...