r22713 - in /trunk: pipe_control/ specific_analyses/ specific_analyses/model_free/ test_suite/unit_tests/_pipe_control/ -- April 11, 2014 - 11:44

Author: bugman
Date: Fri Apr 11 11:44:10 2014
New Revision: 22713

URL: http://svn.gna.org/viewcvs/relax?rev=22713&view=rev
Log:
Shifted the Brownian rotational diffusion tensor parameters into the 
parameter list object.

This only affects the model-free analysis.  The pipe_control.diffusion_tensor 
module functions
default_value(), return_conversion_factor(), return_data_name() and 
return_units() have been
eliminated.  These functions have been merged together with the diffusion 
parameter self._add()
calls in the model-free specific parameter list into the new parameter list 
base class
_add_diffusion_params() method.

To allow the model-free analysis code to differentiate between diffusion and 
model-free parameters,
the new scope() parameter list base class method has been created.  Diffusion 
parameters return
'global' whereas model-free parameters return 'spin'.

The model-free specific API methods default_value() and is_spin_param() have 
been deleted as these
are now provided fully by the parameter list object.  The is_spin_param() 
method has been newly
implemented in the parameter list object to check the parameter scope.


Modified:
    trunk/pipe_control/diffusion_tensor.py
    trunk/pipe_control/opendx.py
    trunk/specific_analyses/api_base.py
    trunk/specific_analyses/model_free/api.py
    trunk/specific_analyses/model_free/parameter_object.py
    trunk/specific_analyses/parameter_object.py
    trunk/test_suite/unit_tests/_pipe_control/test_diffusion_tensor.py

[This mail would be too long, it was shortened to contain the URLs only.]

Modified: trunk/pipe_control/diffusion_tensor.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/pipe_control/diffusion_tensor.py?rev=22713&r1=22712&r2=22713&view=diff

Modified: trunk/pipe_control/opendx.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/pipe_control/opendx.py?rev=22713&r1=22712&r2=22713&view=diff

Modified: trunk/specific_analyses/api_base.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/api_base.py?rev=22713&r1=22712&r2=22713&view=diff

Modified: trunk/specific_analyses/model_free/api.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/model_free/api.py?rev=22713&r1=22712&r2=22713&view=diff

Modified: trunk/specific_analyses/model_free/parameter_object.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/model_free/parameter_object.py?rev=22713&r1=22712&r2=22713&view=diff

Modified: trunk/specific_analyses/parameter_object.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/parameter_object.py?rev=22713&r1=22712&r2=22713&view=diff

Modified: trunk/test_suite/unit_tests/_pipe_control/test_diffusion_tensor.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/test_suite/unit_tests/_pipe_control/test_diffusion_tensor.py?rev=22713&r1=22712&r2=22713&view=diff