mailr23644 - /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/


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Posted by edward on June 05, 2014 - 08:51:
Author: bugman
Date: Thu Jun  5 08:51:23 2014
New Revision: 23644

URL: http://svn.gna.org/viewcvs/relax?rev=23644&view=rev
Log:
Expanded the CaM pseudo-ellipse test data frame_order.py optimisation script.

The optimisation is now implemented as in the auto-analysis, with an 
iterative increase in accuracy
of the quasi-random numerical integration together with an decrease of the 
function tolerance cutoff
for optimisation.  The accuracy of the initial chi-squared calculation is now 
much higher.  And the
accuracy of the initial grid search and the Monte Carlo simulations is now 
much lower.

The results of the new optimisation are included.


Added:
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_fixed_piv.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_true.pdb.gz
   (with props)
Removed:
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos.pdb
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_fixed_piv.pdb
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_true.pdb
Modified:
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.bz2
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.log.bz2
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.pdb.gz
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.py
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order_fixed_piv.pdb.gz
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order_true.pdb.gz

[This mail would be too long, it was shortened to contain the URLs only.]

Removed: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos.pdb
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos.pdb?rev=23643&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos.pdb.gz?rev=23644&view=auto

Removed: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_fixed_piv.pdb
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_fixed_piv.pdb?rev=23643&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_fixed_piv.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_fixed_piv.pdb.gz?rev=23644&view=auto

Removed: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_true.pdb
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_true.pdb?rev=23643&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_true.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/ave_pos_true.pdb.gz?rev=23644&view=auto

Modified: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.bz2?rev=23644&r1=23643&r2=23644&view=diff

Modified: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.log.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.log.bz2?rev=23644&r1=23643&r2=23644&view=diff

Modified: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.pdb.gz?rev=23644&r1=23643&r2=23644&view=diff

Modified: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.py?rev=23644&r1=23643&r2=23644&view=diff

Modified: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order_fixed_piv.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order_fixed_piv.pdb.gz?rev=23644&r1=23643&r2=23644&view=diff

Modified: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order_true.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order_true.pdb.gz?rev=23644&r1=23643&r2=23644&view=diff




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