Author: tlinnet
Date: Thu Jun 5 14:19:55 2014
New Revision: 23651
URL: http://svn.gna.org/viewcvs/relax?rev=23651&view=rev
Log:
Added profiling script for testing the lib/dispersion/cr72.py file.
This script creates the relax datastructures, and issues the call to the
target function.
It was discussed in:
http://thread.gmane.org/gmane.science.nmr.relax.devel/6022.
--------
Checked on MacBook Pro
2.4 GHz Intel Core i5
8 GB 1067 Mhz DDR3 RAM.
Python Distribution -- Python 2.7.3 |EPD 7.3-2 (32-bit)|
Timing for:
2 fields
20 dispersion points
iterations of function call: 1000
Timed for simulating 1 or 100 clustered spins.
svn ls "^/tags"
For tag 3.2.2
svn switch ^/tags/3.2.2
1 spin:
ncalls tottime percall cumtime percall filename:lineno(function)
2000 0.168 0.000 0.198 0.000 cr72.py:100(r2eff_CR72)
1000 0.040 0.000 0.280 0.000
relax_disp.py:456(calc_CR72_chi2)
2000 0.028 0.000 0.039 0.000 chi2.py:32(chi2)
100 spins:
ncalls tottime percall cumtime percall filename:lineno(function)
200000 16.810 0.000 19.912 0.000 cr72.py:100(r2eff_CR72)
1000 4.185 0.004 28.518 0.029
relax_disp.py:456(calc_CR72_chi2)
200000 3.018 0.000 4.144 0.000 chi2.py:32(chi2)
For tag 3.2.1
svn switch ^/tags/3.2.1
1 spin:
ncalls tottime percall cumtime percall filename:lineno(function)
2000 0.696 0.000 0.697 0.000 cr72.py:98(r2eff_CR72)
1000 0.038 0.000 0.781 0.001
relax_disp.py:456(calc_CR72_chi2)
2000 0.031 0.000 0.043 0.000 chi2.py:32(chi2)
100 spins:
ncalls tottime percall cumtime percall filename:lineno(function)
200000 75.880 0.000 76.078 0.000 cr72.py:98(r2eff_CR72)
1000 4.201 0.004 85.519 0.086
relax_disp.py:456(calc_CR72_chi2)
200000 3.513 0.000 4.940 0.000 chi2.py:32(chi2)
Added:
trunk/test_suite/shared_data/dispersion/profiling/
trunk/test_suite/shared_data/dispersion/profiling/profiling_cr72.py
(with props)
trunk/test_suite/shared_data/dispersion/profiling/profiling_cr72.txt
[This mail would be too long, it was shortened to contain the URLs only.]
Added: trunk/test_suite/shared_data/dispersion/profiling/profiling_cr72.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/test_suite/shared_data/dispersion/profiling/profiling_cr72.py?rev=23651&view=auto
Added: trunk/test_suite/shared_data/dispersion/profiling/profiling_cr72.txt
URL:
http://svn.gna.org/viewcvs/relax/trunk/test_suite/shared_data/dispersion/profiling/profiling_cr72.txt?rev=23651&view=auto
r23651 - in /trunk/test_suite/shared_data/dispersion/profiling: ./ profiling_cr72.py profiling_cr72.txt