r23811 - /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/represent_frame_order.py -- June 11, 2014 - 08:19

Author: bugman
Date: Wed Jun 11 08:19:22 2014
New Revision: 23811

URL: http://svn.gna.org/viewcvs/relax?rev=23811&view=rev
Log:
Added a script for recreating the frame order PDB representation and 
displaying it in PyMOL.

This is for the optimised results.


Added:
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/represent_frame_order.py

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/represent_frame_order.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/represent_frame_order.py?rev=23811&view=auto
==============================================================================
--- 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/represent_frame_order.py
        (added)
+++ 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/represent_frame_order.py
        Wed Jun 11 08:19:22 2014
@@ -0,0 +1,12 @@
+# Load the final state.
+state.load('frame_order')
+
+# Re-create the PDB representation (for debugging).
+frame_order.pdb_model(ave_pos_file='ave_pos.pdb.gz', 
rep_file='frame_order.pdb.gz', dist_file=None, force=True)
+
+# PyMOL.
+pymol.view()
+pymol.command('show spheres')
+pymol.frame_order(ave_pos_file='ave_pos_true.pdb.gz', 
rep_file='frame_order_true.pdb.gz', dist_file=None)
+pymol.frame_order(ave_pos_file='ave_pos_fixed_piv.pdb.gz', 
rep_file='frame_order_fixed_piv.pdb.gz', dist_file=None)
+pymol.frame_order(ave_pos_file='ave_pos.pdb.gz', 
rep_file='frame_order.pdb.gz', dist_file=None)