mailr24005 - /branches/disp_spin_speed/lib/dispersion/ns_mmq_2site.py


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Posted by tlinnet on June 16, 2014 - 22:11:
Author: tlinnet
Date: Mon Jun 16 22:11:41 2014
New Revision: 24005

URL: http://svn.gna.org/viewcvs/relax?rev=24005&view=rev
Log:
Fix for documentation in ns mmq 2site/sq/dq/zq/mq.

Now explains which dimension data should be in.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion 
models for Clustered analysis.

Modified:
    branches/disp_spin_speed/lib/dispersion/ns_mmq_2site.py

Modified: branches/disp_spin_speed/lib/dispersion/ns_mmq_2site.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/disp_spin_speed/lib/dispersion/ns_mmq_2site.py?rev=24005&r1=24004&r2=24005&view=diff
==============================================================================
--- branches/disp_spin_speed/lib/dispersion/ns_mmq_2site.py     (original)
+++ branches/disp_spin_speed/lib/dispersion/ns_mmq_2site.py     Mon Jun 16 
22:11:41 2014
@@ -105,31 +105,31 @@
     @keyword m2:            A complex numpy matrix to be populated.
     @type m2:               numpy rank-2, 2D complex64 array
     @keyword R20A:          The transverse, spin-spin relaxation rate for 
state A.
-    @type R20A:             float
+    @type R20A:             numpy float array of rank [NS][[NM][NO][ND]
     @keyword R20B:          The transverse, spin-spin relaxation rate for 
state B.
-    @type R20B:             float
+    @type R20B:             numpy float array of rank [NS][[NM][NO][ND]
     @keyword pA:            The population of state A.
     @type pA:               float
     @keyword pB:            The population of state B.
     @type pB:               float
     @keyword dw:            The chemical exchange difference between states 
A and B in rad/s.
-    @type dw:               float
+    @type dw:               numpy float array of rank [NS][[NM][NO][ND]
     @keyword dwH:           The proton chemical exchange difference between 
states A and B in rad/s.
-    @type dwH:              float
+    @type dwH:              numpy float array of rank [NS][[NM][NO][ND]
     @keyword k_AB:          The rate of exchange from site A to B (rad/s).
     @type k_AB:             float
     @keyword k_BA:          The rate of exchange from site B to A (rad/s).
     @type k_BA:             float
     @keyword inv_tcpmg:     The inverse of the total duration of the CPMG 
element (in inverse seconds).
-    @type inv_tcpmg:        float
+    @type inv_tcpmg:        numpy float array of rank [NS][[NM][NO][ND]
     @keyword tcp:           The tau_CPMG times (1 / 4.nu1).
-    @type tcp:              numpy rank-1 float array
+    @type tcp:              numpy float array of rank [NS][[NM][NO][ND]
     @keyword back_calc:     The array for holding the back calculated R2eff 
values.  Each element corresponds to one of the CPMG nu1 frequencies.
-    @type back_calc:        numpy rank-1 float array
+    @type back_calc:        numpy float array of rank [NS][[NM][NO][ND]
     @keyword num_points:    The number of points on the dispersion curve, 
equal to the length of the tcp and back_calc arguments.
-    @type num_points:       int
+    @type num_points:       numpy int array of rank [NS][[NM][NO][ND]
     @keyword power:         The matrix exponential power array.
-    @type power:            numpy int16, rank-1 array
+    @type power:            numpy int array of rank [NS][[NM][NO][ND]
     """
 
     # Extract shape of experiment.
@@ -254,31 +254,31 @@
     @keyword m2:            A complex numpy matrix to be populated.
     @type m2:               numpy rank-2, 2D complex64 array
     @keyword R20A:          The transverse, spin-spin relaxation rate for 
state A.
-    @type R20A:             float
+    @type R20A:             numpy float array of rank [NS][[NM][NO][ND]
     @keyword R20B:          The transverse, spin-spin relaxation rate for 
state B.
-    @type R20B:             float
+    @type R20B:             numpy float array of rank [NS][[NM][NO][ND]
     @keyword pA:            The population of state A.
     @type pA:               float
     @keyword pB:            The population of state B.
     @type pB:               float
     @keyword dw:            The combined chemical exchange difference 
between states A and B in rad/s.  It should be set to dwH for 1H SQ data, dw 
for heteronuclear SQ data, dwH-dw for ZQ data, and dwH+dw for DQ data.
-    @type dw:               float
+    @type dw:               numpy float array of rank [NS][[NM][NO][ND]
     @keyword dwH:           Unused - this is simply to match the 
r2eff_ns_mmq_2site_mq() function arguments.
-    @type dwH:              float
+    @type dwH:              numpy float array of rank [NS][[NM][NO][ND]
     @keyword k_AB:          The rate of exchange from site A to B (rad/s).
     @type k_AB:             float
     @keyword k_BA:          The rate of exchange from site B to A (rad/s).
     @type k_BA:             float
     @keyword inv_tcpmg:     The inverse of the total duration of the CPMG 
element (in inverse seconds).
-    @type inv_tcpmg:        float
+    @type inv_tcpmg:        numpy float array of rank [NS][[NM][NO][ND]
     @keyword tcp:           The tau_CPMG times (1 / 4.nu1).
-    @type tcp:              numpy rank-1 float array
+    @type tcp:              numpy float array of rank [NS][[NM][NO][ND]
     @keyword back_calc:     The array for holding the back calculated R2eff 
values.  Each element corresponds to one of the CPMG nu1 frequencies.
-    @type back_calc:        numpy rank-1 float array
+    @type back_calc:        numpy float array of rank [NS][[NM][NO][ND]
     @keyword num_points:    The number of points on the dispersion curve, 
equal to the length of the tcp and back_calc arguments.
-    @type num_points:       int
+    @type num_points:       numpy int array of rank [NS][[NM][NO][ND]
     @keyword power:         The matrix exponential power array.
-    @type power:            numpy int16, rank-1 array
+    @type power:            numpy int array of rank [NS][[NM][NO][ND]
     """
 
 




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