Author: bugman
Date: Wed Jul 2 13:59:36 2014
New Revision: 24406
URL: http://svn.gna.org/viewcvs/relax?rev=24406&view=rev
Log:
Redesign of the geometric object representation part of the
frame_order.pdb_model user function.
The positive and negative representations of the frame order motions have
been separated out into
two PDB files rather than being two models of one PDB file. This will help
the user understand that
there are two identical representations of the motions, as both will now be
displayed rather than
having to understand the model concept of PyMOL. The file root is taken, for
example 'frame_order',
and the files 'frame_order_pos.pdb' and 'frame_order_neg.pdb' are created.
If no inverse
representation exists for the model, the file 'frame_order.pdb' will be
created instead.
The Monte Carlo simulations are now also treated differently. Rather than
showing multiple vectors
in the axes representation component within one molecule in the same file as
the frame order
representation, these are now in their own file and each simulation is now a
different model. If an
inverse representation is present, then the positive representation will go
into the file
'frame_order_sim_pos.pdb', for example, and the negative representation into
the file
'frame_order_sim_neg.pdb'. Otherwise the file 'frame_order_sim.pdb' will be
created.
Modified:
branches/frame_order_cleanup/specific_analyses/frame_order/geometric.py
[This mail would be too long, it was shortened to contain the URLs only.]
Modified:
branches/frame_order_cleanup/specific_analyses/frame_order/geometric.py
URL:
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/specific_analyses/frame_order/geometric.py?rev=24406&r1=24405&r2=24406&view=diff
r24406 - /branches/frame_order_cleanup/specific_analyses/frame_order/geometric.py