r24423 - in /branches/frame_order_cleanup: ./ docs/ lib/structure/internal/ prompt/ -- July 03, 2014 - 11:40

Author: bugman
Date: Thu Jul  3 11:40:22 2014
New Revision: 24423

URL: http://svn.gna.org/viewcvs/relax?rev=24423&view=rev
Log:
Merged revisions 24418-24419,24421-24422 via svnmerge from 
svn+ssh://bugman@xxxxxxxxxxx/svn/relax/trunk

........
  r24418 | bugman | 2014-07-02 16:48:30 +0200 (Wed, 02 Jul 2014) | 6 lines
  
  Backported the relax 3.2.3 CHANGES file changes to trunk.
  
  The command used was:
  svn merge -r24416:24417 svn+ssh://bugman@xxxxxxxxxxx/svn/relax/tags/3.2.3 .
........
  r24419 | bugman | 2014-07-02 17:45:14 +0200 (Wed, 02 Jul 2014) | 6 lines
  
  MS Windows fixes to allow relax to run again.
  
  The code for eliminating the GNU readline ^[[?1034h escape code emission on 
Linux systems fails on
  Windows as the 'TERM' environmental variable does not exist in os.environ.
........
  r24421 | bugman | 2014-07-03 08:54:26 +0200 (Thu, 03 Jul 2014) | 8 lines
  
  Better tab completion support in the prompt UI for Mac OS X users.
  
  For some Python versions, the Mac supplied libedit library is used rather 
than GNU readline.  But
  this library uses a completely different language and hence tab completion 
was non-functional on
  these systems.  The library difference is now detected and the correct 
language sent into libedit to
  activate tab completion.
........
  r24422 | bugman | 2014-07-03 11:35:50 +0200 (Thu, 03 Jul 2014) | 13 lines
  
  Improved model handling for the internal structural object.
  
  The set_model() method has been added to allow either a model number to be 
set to the first
  unnumbered model (in preparation for adding new models) or to allow models 
to be renumbered.
  The logic of the add_model() has also been changed.  Rather than looping 
over all atoms of the first
  model and copying them, which does not work due to the model validity 
checks, the entire MolList
  (molecule list) data structure is copied using copy.deepcopy() to make a 
perfect copy of the
  structural data.
  
  The ModelList.add_item() method has also been modified to return the newly 
added or numbered model.
  This is used by the add_model() structural object method to obtain the 
model object.
........

Modified:
    branches/frame_order_cleanup/   (props changed)
    branches/frame_order_cleanup/dep_check.py
    branches/frame_order_cleanup/docs/CHANGES
    branches/frame_order_cleanup/lib/structure/internal/models.py
    branches/frame_order_cleanup/lib/structure/internal/object.py
    branches/frame_order_cleanup/prompt/interpreter.py
    branches/frame_order_cleanup/relax.py

[This mail would be too long, it was shortened to contain the URLs only.]

Modified: branches/frame_order_cleanup/dep_check.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/dep_check.py?rev=24423&r1=24422&r2=24423&view=diff

Modified: branches/frame_order_cleanup/docs/CHANGES
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/docs/CHANGES?rev=24423&r1=24422&r2=24423&view=diff

Modified: branches/frame_order_cleanup/lib/structure/internal/models.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/lib/structure/internal/models.py?rev=24423&r1=24422&r2=24423&view=diff

Modified: branches/frame_order_cleanup/lib/structure/internal/object.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/lib/structure/internal/object.py?rev=24423&r1=24422&r2=24423&view=diff

Modified: branches/frame_order_cleanup/prompt/interpreter.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/prompt/interpreter.py?rev=24423&r1=24422&r2=24423&view=diff

Modified: branches/frame_order_cleanup/relax.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/relax.py?rev=24423&r1=24422&r2=24423&view=diff