r24459 - in /branches/frame_order_cleanup: lib/structure/ lib/structure/represent/ specific_analyses/n_state_model/ -- July 04, 2014 - 15:38

Author: bugman
Date: Fri Jul  4 15:38:30 2014
New Revision: 24459

URL: http://svn.gna.org/viewcvs/relax?rev=24459&view=rev
Log:
Redesign of the geometric representation of the cone structural objects to 
allow for models.

The old representation was not compatible with the PDB model concept whereby 
each model must have
the same number of atoms.  To handle this situation, the cone objects have 
been simplified.
Specifically the cone cap.

The old behaviour was to remove all points outside of the cone when creating 
the cone cap, and then
to stitch the cap to the cone edge in a subsequent step.  Now the behaviour 
is that all points
outside of the distribution are shifted to the cone edge.  This avoids the 
need to stitch the cap to
the edge.  This behaviour means that all cones with the same inc value will 
have the same number of
atoms.

The cones for the pseudo-ellipses are not as nice as the latitudinal lines 
are not strait at the
cone edge, but at least creating multiple models with different cone sizes is 
now possible.


Modified:
    branches/frame_order_cleanup/lib/structure/geometric.py
    branches/frame_order_cleanup/lib/structure/represent/cone.py
    branches/frame_order_cleanup/specific_analyses/n_state_model/uf.py

[This mail would be too long, it was shortened to contain the URLs only.]

Modified: branches/frame_order_cleanup/lib/structure/geometric.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/lib/structure/geometric.py?rev=24459&r1=24458&r2=24459&view=diff

Modified: branches/frame_order_cleanup/lib/structure/represent/cone.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/lib/structure/represent/cone.py?rev=24459&r1=24458&r2=24459&view=diff

Modified: branches/frame_order_cleanup/specific_analyses/n_state_model/uf.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/specific_analyses/n_state_model/uf.py?rev=24459&r1=24458&r2=24459&view=diff