r25360 - /trunk/test_suite/gui_tests/relax_disp.py -- August 27, 2014 - 23:45

Author: tlinnet
Date: Wed Aug 27 23:45:22 2014
New Revision: 25360

URL: http://svn.gna.org/viewcvs/relax?rev=25360&view=rev
Log:
Added gui test Relax_disp.test_r2eff_err_estimate, to test the setting of MC 
Sim to -1 for exponential R2eff error estimation.

task #7822(https://gna.org/task/index.php?7822): Implement user function to 
estimate R2eff and associated errors for exponential curve fitting.

Modified:
    trunk/test_suite/gui_tests/relax_disp.py

Modified: trunk/test_suite/gui_tests/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/test_suite/gui_tests/relax_disp.py?rev=25360&r1=25359&r2=25360&view=diff
==============================================================================
--- trunk/test_suite/gui_tests/relax_disp.py    (original)
+++ trunk/test_suite/gui_tests/relax_disp.py    Wed Aug 27 23:45:22 2014
@@ -543,6 +543,66 @@
         self.assertEqual(cdp.mol[0].res[2].spin[0].name, 'N')
 
 
+    def test_r2eff_err_estimate(self):
+        """Test U{task #7822:<https://gna.org/task/?7822>}, Implement user 
function to estimate R2eff and associated errors for exponential curve 
fitting.."""
+
+        # The paths to the data files.
+        data_path = status.install_path + 
sep+'test_suite'+sep+'shared_data'+sep+'dispersion'+sep+'Kjaergaard_et_al_2013'+sep
+
+        # Simulate the new analysis wizard, selecting the fixed time CPMG 
experiment.
+        self.app.gui.analysis.menu_new(None)
+        page = self.app.gui.analysis.new_wizard.wizard.get_page(0)
+        page.select_disp(None)
+        self.app.gui.analysis.new_wizard.wizard._go_next(None)
+        self.app.gui.analysis.new_wizard.wizard._go_next(None)
+
+        # Get the data.
+        analysis_type, analysis_name, pipe_name, pipe_bundle, uf_exec = 
self.app.gui.analysis.new_wizard.get_data()
+
+        # Set up the analysis.
+        self.app.gui.analysis.new_analysis(analysis_type=analysis_type, 
analysis_name=analysis_name, pipe_name=pipe_name, pipe_bundle=pipe_bundle, 
uf_exec=uf_exec)
+
+        # Alias the analysis.
+        analysis = self.app.gui.analysis.get_page_from_name("Relaxation 
dispersion")
+
+        # Change the results directory.
+        analysis.field_results_dir.SetValue(str_to_gui(ds.tmpdir))
+
+        # Load the sequence.
+        file = data_path + '1_setup_r1rho_GUI.py'
+        self._execute_uf(uf_name='script', file=file, dir=None)
+
+        # De select spins
+        self._execute_uf(uf_name='deselect.spin', spin_id=":1-100")
+        self._execute_uf(uf_name='select.spin', spin_id=":52@N")
+
+        # Deselect all but the 'TP02' model.
+        models = [MODEL_R2EFF, MODEL_NOREX]
+        for i in range(len(analysis.model_field.models_stripped)):
+            if analysis.model_field.models_stripped[i] in models:
+                analysis.model_field.select[i] = True
+            else:
+                analysis.model_field.select[i] = False
+        analysis.model_field.modify()
+
+        # Set the grid search size and number of MC sims.
+        analysis.grid_inc.SetValue(0)
+        analysis.mc_sim_num.SetValue(3)
+        analysis.exp_mc_sim_num.SetValue(-1)
+
+        # Execute relax.
+        analysis.execute(wx.CommandEvent(wx.wxEVT_COMMAND_BUTTON_CLICKED, 
analysis.button_exec_relax.GetId()))
+
+        # Wait for execution to complete.
+        analysis.thread.join()
+
+        # Flush all wx events.
+        wx.Yield()
+
+        # Exceptions in the thread.
+        self.check_exceptions()
+
+
     def test_tp02_data_to_tp02(self):
         """Test the GUI analysis with the relaxation dispersion 'TP02' model 
fitting to the 'TP02' synthetic data."""