r25737 - /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/ -- September 10, 2014 - 18:46

Author: bugman
Date: Wed Sep 10 18:46:29 2014
New Revision: 25737

URL: http://svn.gna.org/viewcvs/relax?rev=25737&view=rev
Log:
Created some test data files for visualising the frame order axis permutation.

This uses the CaM frame order synthetic data for the rotor model to visualise 
the pseudo-ellipse
frame order model axis permutations.  The initial conversion sets the 
pseudo-ellipse torsion angle
cone_sigma_max to the rotor opening half-angle, and the pseudo-elliptic cone 
opening to close to
zero.  Then the axis permutations are performed.  All three solutions are 
optimised.  PDB
representations before and after optimisation are included to illustrate any 
problems.


Added:
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_A.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_B.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_A.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_B.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_A_A.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_A_B.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_B_A.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_B_B.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_A_A.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_A_B.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_B_A.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_B_B.pdb.gz
   (with props)
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pseudo-ellipse.log
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pseudo-ellipse.py
    
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pymol_display.py

[This mail would be too long, it was shortened to contain the URLs only.]

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_A.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_A.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_B.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_B.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_A.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_A.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_B.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_B.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_A_A.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_A_A.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_A_B.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_A_B.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_B_A.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_B_A.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_B_B.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_orig_perm_B_B.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_A_A.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_A_A.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_A_B.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_A_B.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_B_A.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_B_A.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_B_B.pdb.gz
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/fo_perm_B_B.pdb.gz?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pseudo-ellipse.log
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pseudo-ellipse.log?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pseudo-ellipse.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pseudo-ellipse.py?rev=25737&view=auto

Added: 
branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pymol_display.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/permutations/pymol_display.py?rev=25737&view=auto