r25951 - /branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py -- September 22, 2014 - 12:21

Author: bugman
Date: Mon Sep 22 12:21:31 2014
New Revision: 25951

URL: http://svn.gna.org/viewcvs/relax?rev=25951&view=rev
Log:
Huge speed up for the Frame_order.test_auto_analysis user function.

The pseudo-Brownian dynamics simulation via the frame_order.simulate user 
function has been
massively speed up to allow the test to be almost as fast as before.


Modified:
    
branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py

Modified: 
branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py?rev=25951&r1=25950&r2=25951&view=diff
==============================================================================
--- 
branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py
      (original)
+++ 
branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py
      Mon Sep 22 12:21:31 2014
@@ -71,6 +71,11 @@
 OPT_MC = Optimisation_settings()
 OPT_MC.add_min(min_algor='simplex', func_tol=1e-2, max_iter=5, 
sobol_max_points=1)
 
+# Pseudo-Brownian simulation (for the frame_order.simulate user function).
+STEP_SIZE = 2.0
+SNAPSHOT = 2
+TOTAL = 5
+
 
 # Set up the base data pipes.
 #############################
@@ -195,4 +200,4 @@
 ############
 
 # Do not change!
-Frame_order_analysis(data_pipe_full=DATA, data_pipe_subset=SUBSET, 
pipe_bundle=PIPE_BUNDLE, results_dir=ds.tmpdir, opt_rigid=OPT_RIGID, 
opt_subset=OPT_SUBSET, opt_full=OPT_FULL, opt_mc=OPT_MC, mc_sim_num=MC_NUM, 
models=MODELS)
+Frame_order_analysis(data_pipe_full=DATA, data_pipe_subset=SUBSET, 
pipe_bundle=PIPE_BUNDLE, results_dir=ds.tmpdir, opt_rigid=OPT_RIGID, 
opt_subset=OPT_SUBSET, opt_full=OPT_FULL, opt_mc=OPT_MC, mc_sim_num=MC_NUM, 
models=MODELS, brownian_step_size=STEP_SIZE, brownian_snapshot=SNAPSHOT, 
brownian_total=TOTAL)