r25979 - in /trunk: lib/structure/internal/ pipe_control/ pipe_control/structure/ test_suite/unit_tests/_pipe_control/_struc... -- September 23, 2014 - 19:50

Author: bugman
Date: Tue Sep 23 19:50:46 2014
New Revision: 25979

URL: http://svn.gna.org/viewcvs/relax?rev=25979&view=rev
Log:
Converted all structural object methods to use the selection object rather 
that atom ID strings.

This should have a significant impact on the speed of certain operations 
within relax.  The most
obvious effect will be a huge speed up of the interatom.define user function. 
 There should be speed
ups with a number of other user functions relating to structural information. 
 All parts of relax
have been updated for the change.


Modified:
    trunk/lib/structure/internal/object.py
    trunk/pipe_control/interatomic.py
    trunk/pipe_control/structure/main.py
    trunk/pipe_control/structure/mass.py
    trunk/test_suite/unit_tests/_pipe_control/_structure/test_internal.py

[This mail would be too long, it was shortened to contain the URLs only.]

Modified: trunk/lib/structure/internal/object.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/lib/structure/internal/object.py?rev=25979&r1=25978&r2=25979&view=diff

Modified: trunk/pipe_control/interatomic.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/pipe_control/interatomic.py?rev=25979&r1=25978&r2=25979&view=diff

Modified: trunk/pipe_control/structure/main.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/pipe_control/structure/main.py?rev=25979&r1=25978&r2=25979&view=diff

Modified: trunk/pipe_control/structure/mass.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/pipe_control/structure/mass.py?rev=25979&r1=25978&r2=25979&view=diff

Modified: 
trunk/test_suite/unit_tests/_pipe_control/_structure/test_internal.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/test_suite/unit_tests/_pipe_control/_structure/test_internal.py?rev=25979&r1=25978&r2=25979&view=diff