mailr26807 - /branches/nmrglue/pipe_control/nmrglue.py


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Posted by tlinnet on November 28, 2014 - 14:31:
Author: tlinnet
Date: Fri Nov 28 14:31:58 2014
New Revision: 26807

URL: http://svn.gna.org/viewcvs/relax?rev=26807&view=rev
Log:
Added pipe_control function to handle the call to plot of histogram.

Task #7873 (https://gna.org/task/index.php?7873): Write wrapper function to 
nmrglue, to read .ft2 files and process them.
Homepage: http://www.nmrglue.com/
Link to nmrglue discussion: 
https://groups.google.com/forum/#!forum/nmrglue-discuss
The code is develop at Github: https://github.com/jjhelmus/nmrglue/
Google code: https://code.google.com/p/nmrglue/
Documentation: http://nmrglue.readthedocs.org/en/latest/index.html

Modified:
    branches/nmrglue/pipe_control/nmrglue.py

Modified: branches/nmrglue/pipe_control/nmrglue.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/nmrglue/pipe_control/nmrglue.py?rev=26807&r1=26806&r2=26807&view=diff
==============================================================================
--- branches/nmrglue/pipe_control/nmrglue.py    (original)
+++ branches/nmrglue/pipe_control/nmrglue.py    Fri Nov 28 14:31:58 2014
@@ -24,7 +24,7 @@
 
 # relax module imports.
 from lib.errors import RelaxError
-from lib.software.nmrglue import contour_plot, read_spectrum
+from lib.software.nmrglue import contour_plot, hist_plot, read_spectrum
 from pipe_control.pipes import check_pipe
 from pipe_control.spectrum import add_spectrum_id, check_spectrum_id, delete
 
@@ -99,3 +99,21 @@
     # Return the axis instance, for possibility for additional decoration.
     return ax
 
+
+def plot_hist(ndarray=None, show=False):
+    """Flatten the 2D numpy array, and plot as histogram.
+
+    @keyword ndarray:           The numpy array to flatten, and plot as 
histogram.
+    @type ndarray:              numpy array
+    @keyword show:              A flag which if True will make a call to 
matplotlib.pyplot.show().
+    @type show:                 bool
+    @return:                    The matplotlib.axes.AxesSubplot class, which 
can be manipulated to add additional text to the axis.
+    @rtype:                     matplotlib.axes.AxesSubplot
+    """
+
+    # Call the contour plot.
+    ax = hist_plot(ndarray=ndarray, show=show)
+
+    # Return the axis instance, for possibility for additional decoration.
+    return ax
+




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