r27182 - /branches/nmrglue/test_suite/system_tests/nmrglue.py -- January 14, 2015 - 18:46

Author: tlinnet
Date: Wed Jan 14 18:46:42 2015
New Revision: 27182

URL: http://svn.gna.org/viewcvs/relax?rev=27182&view=rev
Log:
Fix for systemtest Nmrglue.test_nmrglue_read, after removing 8MB test file.

The test is now performed on a smaller different file.

Task #7873 (https://gna.org/task/index.php?7873): Write wrapper function to 
nmrglue, to read .ft2 files and process them.
Homepage: http://www.nmrglue.com/
Link to nmrglue discussion: 
https://groups.google.com/forum/#!forum/nmrglue-discuss
The code is develop at Github: https://github.com/jjhelmus/nmrglue/
Google code: https://code.google.com/p/nmrglue/
Documentation: http://nmrglue.readthedocs.org/en/latest/index.html

Modified:
    branches/nmrglue/test_suite/system_tests/nmrglue.py

Modified: branches/nmrglue/test_suite/system_tests/nmrglue.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/nmrglue/test_suite/system_tests/nmrglue.py?rev=27182&r1=27181&r2=27182&view=diff
==============================================================================
--- branches/nmrglue/test_suite/system_tests/nmrglue.py (original)
+++ branches/nmrglue/test_suite/system_tests/nmrglue.py Wed Jan 14 18:46:42 
2015
@@ -147,7 +147,8 @@
         ds.tmpdir = mkdtemp()
 
         # Create path to nmrglue test data.
-        ds.ng_test = status.install_path +sep+ 'extern' +sep+ 'nmrglue' 
+sep+ 'nmrglue_0_5' +sep+ 'tests' +sep+ 'pipe_proc_tests'
+        ds.base_path = status.install_path + 
sep+'test_suite'+sep+'shared_data'+sep+'dispersion'+sep+'repeated_analysis'+sep+'SOD1'
+        ds.ng_test = ds.base_path +sep+ 'cpmg_disp_sod1d90a_060518' +sep+ 
'cpmg_disp_sod1d90a_060518_normal.fid' +sep+ 'ft2_data'
 
 
     def setup_plot_contour(self, show=False):
@@ -416,7 +417,7 @@
         """Test the userfunction spectrum.nmrglue_read."""
 
         # Read the spectrum.
-        fname = 'freq_real.ft2'
+        fname = '128_0_FT.ft2'
         sp_id = 'test'
         self.interpreter.spectrum.nmrglue_read(file=fname, dir=ds.ng_test, 
nmrglue_id=sp_id)
 
@@ -429,12 +430,12 @@
         data = cdp.nmrglue[sp_id].data
 
         # Test the data.
-        self.assertEqual(udic[0]['label'], '15N')
-        self.assertEqual(udic[1]['label'], '13C')
+        self.assertEqual(udic[0]['label'], 'N15')
+        self.assertEqual(udic[1]['label'], 'H1')
         self.assertEqual(udic[0]['freq'], True)
         self.assertEqual(udic[1]['freq'], True)
-        self.assertEqual(udic[0]['size'], 512)
-        self.assertEqual(udic[1]['size'], 4096)
+        self.assertEqual(udic[0]['size'], 256)
+        self.assertEqual(udic[1]['size'], 513)
 
 
     def test_nmrglue_read_several(self):