r27417 - /trunk/pipe_control/structure/main.py -- January 31, 2015 - 11:49

Author: bugman
Date: Sat Jan 31 11:49:51 2015
New Revision: 27417

URL: http://svn.gna.org/viewcvs/relax?rev=27417&view=rev
Log:
Fix for the new pipe_control.structure.main.assemble_structural_coordinates() 
function.

The atom_id argument is now passed into the assemble_atomic_coordinates() 
function of the
lib.structure.internal.coordinates module so that atom subsets are once again 
recognised.


Modified:
    trunk/pipe_control/structure/main.py

Modified: trunk/pipe_control/structure/main.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/pipe_control/structure/main.py?rev=27417&r1=27416&r2=27417&view=diff
==============================================================================
--- trunk/pipe_control/structure/main.py        (original)
+++ trunk/pipe_control/structure/main.py        Sat Jan 31 11:49:51 2015
@@ -130,7 +130,7 @@
     objects, object_names, pipes = assemble_structural_objects(pipes=pipes, 
models=models, molecules=molecules)
 
     # Assemble the atomic coordinates of all molecules.
-    ids, object_id_list, model_list, molecule_list, atom_pos, mol_names, 
res_names, res_nums, atom_names, elements, one_letter_codes, num_mols = 
assemble_atomic_coordinates(objects=objects, object_names=object_names, 
molecules=molecules, models=models)
+    ids, object_id_list, model_list, molecule_list, atom_pos, mol_names, 
res_names, res_nums, atom_names, elements, one_letter_codes, num_mols = 
assemble_atomic_coordinates(objects=objects, object_names=object_names, 
molecules=molecules, models=models, atom_id=atom_id)
 
     # Handle sequence alignments - retrieve the alignment.
     align = None