[bug #7335] AttributeError: PDB instance has no attribute 'heteronuc' -- October 07, 2006 - 19:28

URL:
  <http://gna.org/bugs/?7335>

                 Summary: AttributeError: PDB instance has no attribute
'heteronuc'
                 Project: relax
            Submitted by: bugman
            Submitted on: Saturday 10/07/2006 at 17:28
                Category: None
                Priority: 5 - Normal
                Severity: 5 - Blocker
                  Status: None
                 Privacy: Public
             Assigned to: bugman
         Originator Name: 
        Originator Email: 
             Open/Closed: Open
                 Release: Repository: 1.3 line
        Operating System: All systems

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Details:

Again the three test which failed in bug #7333 (https://gna.org/bugs/?7333)
still fail.  The traceback is:

# Executing the test of Loading the sequence from a PDB file.
#############################################################


relax> pdb.read(run='test', file='test.pdb',
dir='/mnt/removable1/relax-1.3/test_suite/data', model=1, load_seq=1)
Traceback (most recent call last):
  File "/mnt/removable1/relax-1.3/test_suite/test_suite.py", line 268, in
exec_tests
    test_array[i].passed = test_array[i].test(self.run)
  File "/mnt/removable1/relax-1.3/test_suite/sequence.py", line 56, in pdb
    self.relax.interpreter._PDB.read(run, file='test.pdb', dir=sys.path[-1] +
'/test_suite/data', model=1, load_seq=1)
  File "/mnt/removable1/relax-1.3/prompt/pdb.py", line 117, in read
    self.__relax__.generic.pdb.read(run=run, file=file, dir=dir, model=model,
load_seq=load_seq)
  File "/mnt/removable1/relax-1.3/generic_fns/pdb.py", line 156, in read
    if self.heteronuc == self.proton:
AttributeError: PDB instance has no attribute 'heteronuc'







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