Re: [bug #7645] No attribute heteronuc -- November 07, 2006 - 07:43

The solution to bug #7544 (http://gna.org/bugs/?7544) will probably
solve this issue.  They are however separate unrelated bugs which
happen to be within the same area of code.  I might have a go fixing
this one.

Cheers,

Edward


On 11/7/06, Alex Hansen <NO-REPLY.INVALID-ADDRESS@xxxxxxx> wrote:
> URL:
>   <http://gna.org/bugs/?7645>
>
>                  Summary: No attribute heteronuc
>                  Project: relax
>             Submitted by: viochemist
>             Submitted on: Monday 11/06/2006 at 15:59
>                 Category: relax's source code
>                 Priority: 5 - Normal
>                 Severity: 3 - Normal
>                   Status: None
>                  Privacy: Public
>              Assigned to: None
>          Originator Name:
>         Originator Email:
>              Open/Closed: Open
>                  Release: Repository: 1.3 line
>         Operating System: All systems
>
>     _______________________________________________________
>
> Details:
>
> Upon running full_analysis.py with a reduced model set (tm0-tm1, m0-m3) a
> diffusion model was finally chosen for model='final', instead of local_tm.
> However, when it tried to open final/results.bz2 it has the following
> Traceback error.
>
> Traceback (most recent call last):
>   File "relax", line 454, in ?
>     Relax()
>   File "relax", line 166, in __init__
>     self.interpreter.run()
>   File "/local/home/viochem/relax/prompt/interpreter.py", line 213, in run
>     run_script(intro=self.relax.intro_string, local=self.local,
> script_file=self.relax.script_file, quit=1)
>   File "/local/home/viochem/relax/prompt/interpreter.py", line 388, in
> run_script
>     console.interact(intro, local, script_file, quit)
>   File "/local/home/viochem/relax/prompt/interpreter.py", line 340, in
> interact_script
>     execfile(script_file, local)
>   File "full_analysis-final.py", line 437, in ?
>     Main()
>   File "full_analysis-final.py", line 306, in __init__
>     results.write(run='final', file='results', dir='final', force=1)
>   File "/local/home/viochem/relax/prompt/results.py", line 201, in write
>     self.__relax__.generic.results.write(run=run, file=file, directory=dir,
> force=force, format=format, compress_type=compress_type)
>   File "/local/home/viochem/relax/generic_fns/results.py", line 166, in
> write
>     self.write_function(results_file, run)
>   File "/local/home/viochem/relax/specific_fns/model_free.py", line 4682, in
> write_columnar_results
>     pdb_heteronuc = self.relax.data.pdb[self.run].heteronuc
> AttributeError: Element instance has no attribute 'heteronuc'
>
>
> Is this related to Bug#7544 ( http://gna.org/bugs/?7544 ) or is it an
> entirely different bug.
>
>
>
>     _______________________________________________________
>
> Carbon-Copy List:
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> CC Address                          | Comment
> ------------------------------------+-----------------------------
> Available only the item webpage     | Submitted the item
>
>
>
>
>     _______________________________________________________
>
> Reply to this item at:
>
>   <http://gna.org/bugs/?7645>
>
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