URL: <http://gna.org/bugs/?11383> Summary: calling relax_data.display fails Project: relax Submitted by: None Submitted on: Thursday 03/27/2008 at 17:32 CET Category: relax's source code Severity: 3 - Normal Priority: 5 - Normal Status: None Privacy: Public Assigned to: None Originator Name: Ryan MB Hoffman Originator Email: rmb.hoffman@xxxxxxxxx Open/Closed: Open Discussion Lock: Any Release: Repository: 1.2 line Operating System: GNU/Linux _______________________________________________________ Details: Following the resolution of bug 11378, I tried to output the back-calculated R2s. Below is an excerpt from the session. The complete script is attached as is an input PDB. relax> model_free.create_model(run='dummyMF', model='m1', equation='mf_orig', params=['S2'], res_num=None) relax> diffusion_tensor.init(run='dummyMF', params=(2405000.0, 2463000.0, 7986000.0, 80, 80, 60), time_scale=1.0, d_scale=1.0, angle_units='deg', param_types=2, spheroid_type=None, fixed=1) relax> nuclei(heteronuc='N') relax> value.set(run='dummyMF', value=-0.00017199999999999998, param='csa', res_num=None, res_name=None) relax> value.set(run='dummyMF', value=1.0200000000000001e-10, param='r', res_num=None, res_name=None) relax> value.set(run='dummyMF', value=0.80000000000000004, param='S2', res_num=None, res_name=None) relax> relax_data.back_calc(run='dummyMF', ri_label='R2', frq_label='800', frq=800.0) relax> relax_data.display(run='dummyMF', ri_label='R2', frq_label='800') Traceback (most recent call last): [...portion excluded...] relax_data.display(run='dummyMF',ri_label='R2',frq_label='800') File "/home/user/bin/relax-1.2.12/prompt/relax_data.py", line 243, in display self.__relax__.specific.relax_data.display(run=run, ri_label=ri_label, frq_label=frq_label) File "/home/user/bin/relax-1.2.12/specific_fns/relax_data.py", line 500, in display self.relax.generic.value.write_data(self.run, (self.ri_label, self.frq_label), sys.stdout, return_value=self.return_value) TypeError: write_data() takes at most 3 non-keyword arguments (4 given) _______________________________________________________ File Attachments: ------------------------------------------------------- Date: Thursday 03/27/2008 at 17:32 CET Name: bug2.rlx Size: 678B By: None <http://gna.org/bugs/download.php?file_id=4058> ------------------------------------------------------- Date: Thursday 03/27/2008 at 17:32 CET Name: bugdemo2.pdb Size: 3kB By: None <http://gna.org/bugs/download.php?file_id=4059> _______________________________________________________ Reply to this item at: <http://gna.org/bugs/?11383> _______________________________________________ Message sent via/by Gna! http://gna.org/