mailRe: r6834 - /1.3/generic_fns/structure/geometric.py


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Posted by Edward d'Auvergne on July 08, 2008 - 14:55:
Hi,

With the fixes you've been making and the changes I made to the
structural object code, I think the diffusion tensor representation
should soon be functioning again.  Do you see any real technical
issues preventing this?  I hope my changes haven't caused you too many
problems.  They were necessary though, as the PDB reading and writing
code was broken.

Regards,

Edward


On Tue, Jul 8, 2008 at 6:42 AM,  <sebastien.morin.1@xxxxxxxxx> wrote:
Author: semor
Date: Tue Jul  8 06:42:46 2008
New Revision: 6834

URL: http://svn.gna.org/viewcvs/relax?rev=6834&view=rev
Log:
Corrected a typo introduced in r6815.


Modified:
   1.3/generic_fns/structure/geometric.py

Modified: 1.3/generic_fns/structure/geometric.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/generic_fns/structure/geometric.py?rev=6834&r1=6833&r2=6834&view=diff
==============================================================================
--- 1.3/generic_fns/structure/geometric.py (original)
+++ 1.3/generic_fns/structure/geometric.py Tue Jul  8 06:42:46 2008
@@ -611,7 +611,7 @@
        atom_id_ext = ''

    # The origin atom.
-    structure.atom_add(pdb_record='HETATM', atom_num='R_vect'+atom_id_ext, 
atom_name=R, res_name=res_name_vect, chain_id=chain_id, res_num=res_num, 
pos=origin, segment_id=None, element='C', struct_index=None)
+    structure.atom_add(pdb_record='HETATM', atom_num='R_vect'+atom_id_ext, 
atom_name='R', res_name=res_name_vect, chain_id=chain_id, res_num=res_num, 
pos=origin, segment_id=None, element='C', struct_index=None)

    # Create the PDB residue representing the vector.
    structure.atom_add(pdb_record='HETATM', atom_num=atom_name+atom_id_ext, 
atom_name=atom_name, res_name=res_name_vect, chain_id=chain_id, 
res_num=res_num, pos=origin+vector*scale, segment_id=None, element='C', 
struct_index=None)


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