mail[bug #12409] Failure of the final stage of the 'full_analysis.py' script.


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Posted by Edward d Auvergne on October 05, 2008 - 13:53:

Follow-up Comment #2, bug #12409 (project relax):

The real bug is a few lines before the traceback.  The sphere data pipe has a
PDB file but it isn't being read in.  Then the prolate data pipe fails in
aliasing this structure.  The lines are:

relax> results.read(file='results', dir='sphere/round_11/opt')
Opening the file 'sphere/round_11/opt/results.bz2' for reading.
RelaxWarning: The structure file '1F35_H.pdb' cannot be found in the current
directory or the directory of the results file.

relax> pipe.create(pipe_name='prolate', pipe_type='mf')

relax> results.read(file='results', dir='prolate/round_6/opt')
Opening the file 'prolate/round_6/opt/results.bz2' for reading.
Traceback (most recent call last):
File "/media/disk/relax/relax-1.3/relax", line 408, in <module> 
...

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