mailRe: r10992 - /branches/bieri_gui/gui_bieri/analyses/auto_model_free.py


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Posted by Edward d'Auvergne on March 15, 2010 - 23:42:
Would it be better to save this idea for later, after the initial
release?  For example, this could be indicated by some status
indicating that some of the global models are finished by changing the
colour of those buttons.  How would the interface know this
information though?  This could be quite advanced, with the user
specifying the location of the files for a certain global model, and
relax (through the auto-analysis code as it currently does) then
determines which round of optimisation it was up to.  Then if the user
selects that global model, it will be further optimised (i.e. freeze,
shut down, etc.).  Specifying the location of files allows parts of
the analysis to be run on different machines.  Although extending
Gary's multi-processor would be much more powerful.  What do you
think?

Regards,

Edward



On 15 March 2010 22:13, Michael Bieri <michael.bieri@xxxxxx> wrote:
The problem is, if a user started, let's say, the sphere diffusion
tensor after finishing local tm and the computer freezes, shuts down or
whatever... Then, he has to have an opportunity to enable all the
tensors to calculate. Or if the user started the calculation on one
computer and continues on another. I would suggest to add a menu entry
that enables all the buttons in the dialog to choose the tensors. What
do you think?


Edward d'Auvergne schrieb:
Hi Michael,

I'm not exactly sure what you mean by this design?  The local tm model
must be optimised in the very first step for the dAuvergne_protocol
auto-analysis.  I'm guessing the purpose is to exclude certain
diffusion tensors from the analysis, for example if there is no PDB
structure yet.  Is this correct?  Maybe it could be set up similarly
to the choice of model-free models to use?  I.e. placing the 4 buttons
from the "Select Calculation Mode" window (after clicking on "Execute
relax"), specifically the sphere, prolate spheroid, oblate spheroid,
and ellipsoid buttons, directly into the auto-model-free frame and
using this to turn off certain diffusion models.  There will be more
room for this after deletion of the model selection GUI element.  But
this would depend on the exact purpose of this change.

Cheers,

Edward



On 14 March 2010 23:08,  <michael.bieri@xxxxxx> wrote:

Author: michaelbieri
Date: Sun Mar 14 23:08:57 2010
New Revision: 10992

URL: http://svn.gna.org/viewcvs/relax?rev=10992&view=rev
Log:
Local tm flag was temporarly set as True to enable to select each tensor 
to be calculated without first calculating local tm model.

I propose we add a menu entry (in Settings) that users can enable all the 
tensor calculations.

Modified:
   branches/bieri_gui/gui_bieri/analyses/auto_model_free.py

Modified: branches/bieri_gui/gui_bieri/analyses/auto_model_free.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/bieri_gui/gui_bieri/analyses/auto_model_free.py?rev=10992&r1=10991&r2=10992&view=diff
==============================================================================
--- branches/bieri_gui/gui_bieri/analyses/auto_model_free.py (original)
+++ branches/bieri_gui/gui_bieri/analyses/auto_model_free.py Sun Mar 14 
23:08:57 2010
@@ -779,7 +779,7 @@
        """

        # The dialog.
-        dlg = Select_tensor(None, -1, "", 
local_tm_flag=local_tm_complete)
+        dlg = Select_tensor(None, -1, "", local_tm_flag=True)
        dlg.ShowModal()

        # Return the choice.


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