Re: r11117 - /branches/bieri_gui/gui_bieri/analyses/auto_model_free.py -- April 28, 2010 - 00:21

Sorry, this was already done by synchronizing the GUI with the data 
storage (see sync_ds() ). The entries are not read from the GUI, but 
from the relax data storage, so it was already converted into string.

Cheers


Edward d'Auvergne wrote:
> Hi,
>
> Should "entries = self.data.unresolved" be replaced by "entries =
> str(self.data.unresolved)" to avoid Unicode issues?
>
> Regards,
>
> Edward
>
>
> On 22 April 2010 06:36,  <michael.bieri@xxxxxxxxxxxxx> wrote:
>   
> > Author: michaelbieri
> > Date: Thu Apr 22 06:36:10 2010
> > New Revision: 11117
> >
> > URL: http://svn.gna.org/viewcvs/relax?rev=11117&view=rev
> > Log:
> > Dummy file is created for unresolved residues.
> >
> > Modified:
> >    branches/bieri_gui/gui_bieri/analyses/auto_model_free.py
> >
> > Modified: branches/bieri_gui/gui_bieri/analyses/auto_model_free.py
> > URL: 
> > http://svn.gna.org/viewcvs/relax/branches/bieri_gui/gui_bieri/analyses/auto_model_free.py?rev=11117&r1=11116&r2=11117&view=diff
> > ==============================================================================
> > --- branches/bieri_gui/gui_bieri/analyses/auto_model_free.py (original)
> > +++ branches/bieri_gui/gui_bieri/analyses/auto_model_free.py Thu Apr 22 
> > 06:36:10 2010
> > @@ -34,6 +34,8 @@
> >  # relax module imports.
> >  from auto_analyses.dauvergne_protocol import dAuvergne_protocol
> >  from data import Relax_data_store; ds = Relax_data_store()
> > +from relax_io import DummyFileObject
> > +
> >
> >  # relax GUI module imports.
> >  from gui_bieri.analyses.results_analysis import model_free_results, 
> > see_results
> > @@ -558,10 +560,13 @@
> >             data.relax_data.append(['R2', str(frq), float(frq)*1e6, files[2], 
> > None, None, 2, 3, 4, 5, 6, 7, None])
> >             data.relax_data.append(['NOE', str(frq), float(frq)*1e6, 
> > files[0], None, None, 2, 3, 4, 5, 6, 7, None])
> >
> > -        # The file containing the list of unresolved spins to exclude from 
> > the analysis (set this to None if no spin is to be excluded).
> > -        # FIXME:  The unresolved file is not properly handled!
> > -        data.unres = self.data.results_dir_model + sep + 'unresolved'
> > -        data.unres = None
> > +        # Unresolved resiudes
> > +        file = DummyFileObject()
> > +        entries = self.data.unresolved
> > +        entries = replace(entries, ',', '\n')
> > +        file.write(entries)
> > +        file.close()
> > +        data.unres = file
> >
> >         # A file containing a list of spins which can be dynamically excluded 
> > at any point within the analysis (when set to None, this variable is not 
> > used).
> >         data.exclude = None
> >
> >
> > _______________________________________________
> > relax (http://nmr-relax.com)
> >
> > This is the relax-commits mailing list
> > relax-commits@xxxxxxx
> >
> > To unsubscribe from this list, get a password
> > reminder, or change your subscription options,
> > visit the list information page at
> > https://mail.gna.org/listinfo/relax-commits
> >
> >     
>
> _______________________________________________
> relax (http://nmr-relax.com)
>
> This is the relax-devel mailing list
> relax-devel@xxxxxxx
>
> To unsubscribe from this list, get a password
> reminder, or change your subscription options,
> visit the list information page at
> https://mail.gna.org/listinfo/relax-devel
>
>
>