Re: r12841 - /1.3/sample_scripts/model_free/diff_min.py -- May 31, 2011 - 17:02

Hi again,

I think it is ok... :p

We got of course some new-comers who are a bit afraid of the code, but 
also a few people who have been using relax now start to interact and 
reply to questions before we do...

We are soon reaching a balance and explaining like we do to new-comers 
what is the reason for their problem or their bug, helps them realize 
how it works and become super-users..!

Cheers,


Séb  :)

P.S. I hope the weather is better in Munich than in Basel..!


On 11-05-31 4:51 PM, Edward d'Auvergne wrote:
> Yeah, but unfortunately users seem to expect everything on a silver platter ;)
>
>
>
>
> On 31 May 2011 16:49, Sébastien Morin<sebastien.morin.1@xxxxxxxxx>  wrote:
> > Hi,
> >
> > Yes, that might be, but hopefully the community grows and we will catch them
> > rapidly...
> >
> > People just have to keep in mind that sample script are there to help them,
> > not to do everything for them...  :p
> >
> > Cheers,
> >
> >
> > Séb  :)
> >
> >
> > On 11-05-31 4:40 PM, Edward d'Auvergne wrote:
> > > Cheers, I missed that one.  I think there are a number of scripts that
> > > are out of date though :S
> > >
> > > Regards,
> > >
> > > Edward
> > >
> > >
> > > On 31 May 2011 16:29,<sebastien.morin@xxxxxxxxx>    wrote:
> > > > Author: semor
> > > > Date: Tue May 31 16:29:49 2011
> > > > New Revision: 12841
> > > >
> > > > URL: http://svn.gna.org/viewcvs/relax?rev=12841&view=rev
> > > > Log:
> > > > Updates for the diffusion tensor optimization sample script.
> > > >
> > > > The problem was identified (for sample script "dasha.py")
> > > > by Shantanu Bhattacharyya<shantanu01 att cmu dott edu>    in the post at
> > > > https://mail.gna.org/public/relax-users/2011-05/msg00018.html
> > > > (Message-id:
> > > > <7a068ac7a9e90b8e8d374b334a20d4be.squirrel@xxxxxxxxxxxxxxxxxxxxxx>).
> > > >
> > > > Modified:
> > > >     1.3/sample_scripts/model_free/diff_min.py
> > > >
> > > > Modified: 1.3/sample_scripts/model_free/diff_min.py
> > > > URL:
> > > > http://svn.gna.org/viewcvs/relax/1.3/sample_scripts/model_free/diff_min.py?rev=12841&r1=12840&r2=12841&view=diff
> > > >
> > > > ==============================================================================
> > > > --- 1.3/sample_scripts/model_free/diff_min.py (original)
> > > > +++ 1.3/sample_scripts/model_free/diff_min.py Tue May 31 16:29:49 2011
> > > > @@ -24,11 +24,7 @@
> > > >
> > > >
> > > >   # Set the data pipe names (also the names of preset model-free models).
> > > > -#pipes = ['m1']
> > > >   pipes = ['m1', 'm2', 'm3', 'm4', 'm5', 'm6', 'm7', 'm8', 'm9']
> > > > -
> > > > -# Nuclei type
> > > > -value.set('15N', 'heteronucleus')
> > > >
> > > >   # Minimise the model-free parameters.
> > > >   print("\n\n\n\n\n")
> > > > @@ -40,6 +36,9 @@
> > > >   for name in pipes:
> > > >      # Create the data pipe.
> > > >      pipe.create(name, 'mf')
> > > > +
> > > > +    # Nuclei type
> > > > +    value.set('15N', 'heteronucleus')
> > > >
> > > >      # Load the sequence.
> > > >      sequence.read('noe.500.out', res_num_col=1)
> > > >
> > > >
> > > > _______________________________________________
> > > > relax (http://nmr-relax.com)
> > > >
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> > --
> > Sébastien Morin, Ph.D.
> > Postdoctoral Fellow, S. Grzesiek NMR Laboratory
> > Department of Structural Biology
> > Biozentrum, Universität Basel
> > Klingelbergstrasse 70
> > 4056 Basel
> > Switzerland

--
Sébastien Morin, Ph.D.
Postdoctoral Fellow, S. Grzesiek NMR Laboratory
Department of Structural Biology
Biozentrum, Universität Basel
Klingelbergstrasse 70
4056 Basel
Switzerland