Hi Stacy,
I don't know if you noticed, but I have now released the new 2.2.2
version of relax (https://gna.org/forum/forum.php?forum_id=2377)
containing all the fixes to the bug reports you filed. As you are not
subscribed to the relax-announce mailing list, you may have missed
this information. To receive posts about new relax releases, there
are a few possibilities:
- Subscribe to the relax-announce mailing list at
https://mail.gna.org/listinfo/relax-announce/.
- Follow the relax project on Freecode (see
https://freecode.com/projects/nmr-relax).
- Subscribe to relax RSS feeds or use the NNTP newsreader at Gmane
(http://dir.gmane.org/gmane.science.nmr.relax.announce).
Regards,
Edward
On 5 February 2013 10:49, Edward d'Auvergne <edward@xxxxxxxxxxxxx> wrote:
Hi Stacy,
I have now fixed all bugs preventing the model-free analysis in the
GUI from running without a PDB file (this is in the
dauvergne_protocol.py analysis, see
http://www.nmr-relax.com/manual/new_protocol_in_GUI.html and
http://www.nmr-relax.com/manual/d_Auvergne_protocol_script_mode_sample_script.html).
You may find other bugs as this 'code path' is not very well tested
in the relax test suite. Hence when I perform something called 'code
refactoring' to improve relax, breakages may occur that I don't see.
The aim for the relax test suite is to cover all possible ways of
using relax, but unfortunately this coverage is incomplete. If you do
see any more issues, could you please submit a bug report. If you
attach files with the minimum amount of data to reproduce the bug, I
can then add this to the test suite. For example, I hope you don't
mind but I added your data for residues 9 and 10 here
http://svn.gna.org/viewcvs/relax/trunk/test_suite/shared_data/model_free/bug_20479_gui_final_pipe/
and
http://svn.gna.org/viewcvs/relax/trunk/test_suite/shared_data/saved_states/bug_20480.bz2?view=log.
The addition of this data and new tests means that the problems you
are seeing can never come back to relax.
There are two ways you can obtain these fixes. The first is the
simplest - you could wait until I release a new version of relax.
Though when a new release occurs is unknown (pressure from relax users
helps). Alternatively you can use the subversion program to obtain a
copy of relax from the source code repository (for details see
http://www.nmr-relax.com/manual/Latest_sources_relax_repositories.html
or http://www.nmr-relax.com/download.html#Source_code_repository).
Regards,
Edward
On 4 February 2013 22:30, Edward d Auvergne
<NO-REPLY.INVALID-ADDRESS@xxxxxxx> wrote:
Update of bug #20479 (project relax):
Category: None => GUI
Status: Confirmed => In Progress
_______________________________________________________
Follow-up Comment #5:
This is a GUI only problem.
_______________________________________________________
Reply to this item at:
<http://gna.org/bugs/?20479>
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Re: [bug #20479] Model-free analysis failed after creating local tm