mailRe: relax 3.0.0 python error


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Posted by Edward d'Auvergne on August 26, 2013 - 10:52:
Hi Jack,

Thank you for the information.  I have now fixed this problem:

http://article.gmane.org/gmane.science.nmr.relax.scm/18352

This script is just in relax as a permanent reference as it was used
to generate some of the test data.  It is never used by relax and it
should normally never be imported.  So it is a Fink specific issue.
Somehow it was corrupted with time - a standard bit-rot issue.  I
would have assumed that such problems would never be noticed.  The
change required to remove the syntax error is in that link.  If this
requires a new relax release, please say.

Cheers,

Edward



On 15 August 2013 16:43, Jack Howarth <howarth@xxxxxxxxxxxxxxxx> wrote:
Edward,
   While preparing fink packaging for the new relax 3.0.0 release, I 
noticed an error
in the python scripts. When installing relax-py27-3.0.0, I get the 
following error as
the the frame_order_pseudo_ellipse.py python script is compiled. What is 
the correct
syntax for that particular call to pymol.command?

Setting up relax-py27 (3.0.0-1) ...
Compiling
/sw/lib/relax-py27/test_suite/shared_data/frame_order/cam/pseudo_ellipse_free_rotor/frame_order_pseudo_ellipse.py
 ...
   File
"/sw/lib/relax-py27/test_suite/shared_data/frame_order/cam/pseudo_ellipse_free_rotor/frame_order_pseudo_ellipse.py",
 line 154
    pymol.command('show spheres'_pseudo_ellipse)
                                              ^
SyntaxError: invalid syntax

Thanks in advance for any clarification.
             Jack

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