mailRe: Systemtest errors on mac:


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Posted by Troels Emtekær Linnet on December 06, 2013 - 11:34:
Good.

I was worried, that changing the return as integers of residue numbers
from NMRView files have had an impact.

Best
Troels

2013/12/6 Edward d'Auvergne <edward@xxxxxxxxxxxxx>:
Hi,

Don't worry about these, I'm making a few changes to the R1rho data
handling in relax to match the exact behaviour of cpmg_fit so there
will be some failing tests from time to time.

Regards,

Edward



On 6 December 2013 11:23, Troels Emtekær Linnet <tlinnet@xxxxxxxxxxxxx> 
wrote:
The following errors are now showing on my mac.

ERROR:
relax -s Relax_disp.test_tp02_data_to_tap03


FAIL:
relax -s Relax_disp.test_tp02_data_to_mp05
relax -s Relax_disp.test_tp02_data_to_ns_r1rho_2site
relax -s Relax_disp.test_tp02_data_to_tp02

-----
relax -s Relax_disp.test_tp02_data_to_tap03

Parameter            Value (:1)           Value (:2)
Traceback (most recent call last):
  File 
"/Users/tlinnet/software/relax_trunk/test_suite/system_tests/relax_disp.py",
line 3090, in test_tp02_data_to_tap03
    print("%-20s %20.15g %20.15g" % ("R2 (500 MHz)",
spin1.r2[r20_key1], spin2.r2[r20_key1]))
AttributeError: 'SpinContainer' object has no attribute 'r2'
----
relax -s Relax_disp.test_tp02_data_to_mp05

Spin :1@N.
Traceback (most recent call last):
  File 
"/Users/tlinnet/software/relax_trunk/test_suite/system_tests/relax_disp.py",
line 3045, in test_tp02_data_to_mp05
    self.assertAlmostEqual(spin.r2[r20_key1]/10,
r1rho_prime[spin_index][0]/10, 4)
AssertionError: 1.0424650934825674 != 1.00058087306952 within 4 places
----
relax -s Relax_disp.test_tp02_data_to_ns_r1rho_2site

Traceback (most recent call last):
  File 
"/Users/tlinnet/software/relax_trunk/test_suite/system_tests/relax_disp.py",
line 2980, in test_tp02_data_to_ns_r1rho_2site
    self.assertAlmostEqual(spin1.r2[r20_key1], 9.9963793866185, 4)
AssertionError: 10.422607305499888 != 9.9963793866185 within 4 places
----
relax -s Relax_disp.test_tp02_data_to_tp02

Spin :1@N.
Traceback (most recent call last):
  File 
"/Users/tlinnet/software/relax_trunk/test_suite/system_tests/relax_disp.py",
line 3143, in test_tp02_data_to_tp02
    self.assertAlmostEqual(spin.r2[r20_key1]/10,
r1rho_prime[spin_index][0]/10, 4)
AssertionError: 1.0423364621814701 != 1.0 within 4 places
-------

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