URL:
<http://gna.org/bugs/?21481>
Summary: System test fail with "ImportError: No module named
dauvergne_protocol"
Project: relax
Submitted by: jlec
Submitted on: Tue 14 Jan 2014 10:40:23 AM GMT
Category: Test suite
Severity: 3 - Normal
Priority: 5 - Normal
Status: None
Privacy: Public
Assigned to: None
Originator Name:
Originator Email:
Open/Closed: Open
Discussion Lock: Any
Release: 3.1.2
Operating System: GNU/Linux
_______________________________________________________
Details:
$ python relax.py -s
Echoing of user function calls has been enabled.
=============================
= System / functional tests =
=============================
............................................................................................EE..EE....E........................................................................................................................................................................................................................................................
======================================================================
ERROR: test_bug_20213_asn_sidechain (test_suite.system_tests.model_free.Mf)
U{Bug #20213<https://gna.org/bugs/?20213>} catch, the model selection failure
due to the presence of Asp and Gln sidechain N spins.
----------------------------------------------------------------------
relax> pipe.create(pipe_name='mf', pipe_type='mf', bundle=None)
relax 3.1.2
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2014 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL). This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty. For details type 'GPL' within the
relax prompt.
Assistance in using the relax prompt and scripting interface can be accessed
by typing 'help' within
the prompt.
Processor fabric: Uni-processor.
Traceback (most recent call last):
File "test_suite/system_tests/model_free.py", line 284, in
test_bug_20213_asn_sidechain
self.script_exec(status.install_path +
sep+'test_suite'+sep+'system_tests'+sep+'scripts'+sep+'model_free'+sep+'bug_20213_asn_sidechain.py')
File "test_suite/system_tests/base_classes.py", line 62, in script_exec
self.interpreter.run(script_file=script)
File "prompt/interpreter.py", line 278, in run
return run_script(intro=self.__intro_string, local=locals(),
script_file=script_file, quit=self.__quit_flag,
show_script=self.__show_script, raise_relax_error=self.__raise_relax_error)
File "prompt/interpreter.py", line 576, in run_script
return console.interact(intro, local, script_file, quit,
show_script=show_script, raise_relax_error=raise_relax_error)
File "prompt/interpreter.py", line 468, in interact_script
exec_script(script_file, local)
File "prompt/interpreter.py", line 341, in exec_script
runpy.run_module(module, globals)
File "/usr/lib64/python2.7/runpy.py", line 180, in run_module
fname, loader, pkg_name)
File "/usr/lib64/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File
"/mnt/tmpfs/relax-3.1.2/test_suite/system_tests/scripts/model_free/bug_20213_asn_sidechain.py",
line 6, in <module>
from auto_analyses.dauvergne_protocol import dAuvergne_protocol
ImportError: No module named dauvergne_protocol
======================================================================
ERROR: test_bug_20464_missing_ri_data (test_suite.system_tests.model_free.Mf)
U{Bug #20464<https://gna.org/bugs/?20464>} catch, the failure due to missing
relaxation data.
----------------------------------------------------------------------
relax> pipe.create(pipe_name='mf', pipe_type='mf', bundle=None)
relax> reset()
relax 3.1.2
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2014 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL). This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty. For details type 'GPL' within the
relax prompt.
Assistance in using the relax prompt and scripting interface can be accessed
by typing 'help' within
the prompt.
Processor fabric: Uni-processor.
Traceback (most recent call last):
File "test_suite/system_tests/model_free.py", line 294, in
test_bug_20464_missing_ri_data
self.script_exec(status.install_path +
sep+'test_suite'+sep+'system_tests'+sep+'scripts'+sep+'model_free'+sep+'bug_20464_missing_ri_data.py')
File "test_suite/system_tests/base_classes.py", line 62, in script_exec
self.interpreter.run(script_file=script)
File "prompt/interpreter.py", line 278, in run
return run_script(intro=self.__intro_string, local=locals(),
script_file=script_file, quit=self.__quit_flag,
show_script=self.__show_script, raise_relax_error=self.__raise_relax_error)
File "prompt/interpreter.py", line 576, in run_script
return console.interact(intro, local, script_file, quit,
show_script=show_script, raise_relax_error=raise_relax_error)
File "prompt/interpreter.py", line 468, in interact_script
exec_script(script_file, local)
File "prompt/interpreter.py", line 341, in exec_script
runpy.run_module(module, globals)
File "/usr/lib64/python2.7/runpy.py", line 180, in run_module
fname, loader, pkg_name)
File "/usr/lib64/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File
"/mnt/tmpfs/relax-3.1.2/test_suite/system_tests/scripts/model_free/bug_20464_missing_ri_data.py",
line 9, in <module>
from auto_analyses.dauvergne_protocol import dAuvergne_protocol
ImportError: No module named dauvergne_protocol
======================================================================
ERROR: test_bug_20563_missing_ri_error
(test_suite.system_tests.model_free.Mf)
U{Bug #20563<https://gna.org/bugs/?20563>} catch, the failure due to missing
relaxation data errors.
----------------------------------------------------------------------
relax> pipe.create(pipe_name='mf', pipe_type='mf', bundle=None)
relax> reset()
relax 3.1.2
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2014 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL). This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty. For details type 'GPL' within the
relax prompt.
Assistance in using the relax prompt and scripting interface can be accessed
by typing 'help' within
the prompt.
Processor fabric: Uni-processor.
Traceback (most recent call last):
File "test_suite/system_tests/model_free.py", line 304, in
test_bug_20563_missing_ri_error
self.script_exec(status.install_path +
sep+'test_suite'+sep+'system_tests'+sep+'scripts'+sep+'model_free'+sep+'bug_20563_missing_ri_error.py')
File "test_suite/system_tests/base_classes.py", line 62, in script_exec
self.interpreter.run(script_file=script)
File "prompt/interpreter.py", line 278, in run
return run_script(intro=self.__intro_string, local=locals(),
script_file=script_file, quit=self.__quit_flag,
show_script=self.__show_script, raise_relax_error=self.__raise_relax_error)
File "prompt/interpreter.py", line 576, in run_script
return console.interact(intro, local, script_file, quit,
show_script=show_script, raise_relax_error=raise_relax_error)
File "prompt/interpreter.py", line 468, in interact_script
exec_script(script_file, local)
File "prompt/interpreter.py", line 341, in exec_script
runpy.run_module(module, globals)
File "/usr/lib64/python2.7/runpy.py", line 180, in run_module
fname, loader, pkg_name)
File "/usr/lib64/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File
"/mnt/tmpfs/relax-3.1.2/test_suite/system_tests/scripts/model_free/bug_20563_missing_ri_error.py",
line 9, in <module>
from auto_analyses.dauvergne_protocol import dAuvergne_protocol
ImportError: No module named dauvergne_protocol
======================================================================
ERROR: test_bug_20613_auto_mf_diff_tensor_pdb
(test_suite.system_tests.model_free.Mf)
U{Bug #20613<https://gna.org/bugs/?20613>} catch, the failure of the
auto-analysis due to diffusion tensor PDB creation for the local tm global
model.
----------------------------------------------------------------------
relax> pipe.create(pipe_name='mf', pipe_type='mf', bundle=None)
relax> reset()
relax 3.1.2
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2014 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL). This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty. For details type 'GPL' within the
relax prompt.
Assistance in using the relax prompt and scripting interface can be accessed
by typing 'help' within
the prompt.
Processor fabric: Uni-processor.
Traceback (most recent call last):
File "test_suite/system_tests/model_free.py", line 462, in
test_bug_20613_auto_mf_diff_tensor_pdb
self.script_exec(status.install_path +
sep+'test_suite'+sep+'system_tests'+sep+'scripts'+sep+'model_free'+sep+'bug_20613_auto_mf_diff_tensor_pdb.py')
File "test_suite/system_tests/base_classes.py", line 62, in script_exec
self.interpreter.run(script_file=script)
File "prompt/interpreter.py", line 278, in run
return run_script(intro=self.__intro_string, local=locals(),
script_file=script_file, quit=self.__quit_flag,
show_script=self.__show_script, raise_relax_error=self.__raise_relax_error)
File "prompt/interpreter.py", line 576, in run_script
return console.interact(intro, local, script_file, quit,
show_script=show_script, raise_relax_error=raise_relax_error)
File "prompt/interpreter.py", line 468, in interact_script
exec_script(script_file, local)
File "prompt/interpreter.py", line 341, in exec_script
runpy.run_module(module, globals)
File "/usr/lib64/python2.7/runpy.py", line 180, in run_module
fname, loader, pkg_name)
File "/usr/lib64/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File
"/mnt/tmpfs/relax-3.1.2/test_suite/system_tests/scripts/model_free/bug_20613_auto_mf_diff_tensor_pdb.py",
line 9, in <module>
from auto_analyses.dauvergne_protocol import dAuvergne_protocol
ImportError: No module named dauvergne_protocol
======================================================================
ERROR: test_dauvergne_protocol (test_suite.system_tests.model_free.Mf)
Check the execution of auto_analyses.dauvergne_protocol.
----------------------------------------------------------------------
relax> pipe.create(pipe_name='mf', pipe_type='mf', bundle=None)
relax 3.1.2
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2014 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL). This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty. For details type 'GPL' within the
relax prompt.
Assistance in using the relax prompt and scripting interface can be accessed
by typing 'help' within
the prompt.
Processor fabric: Uni-processor.
Traceback (most recent call last):
File "test_suite/system_tests/model_free.py", line 500, in
test_dauvergne_protocol
self.script_exec(status.install_path +
sep+'test_suite'+sep+'system_tests'+sep+'scripts'+sep+'model_free'+sep+'dauvergne_protocol.py')
File "test_suite/system_tests/base_classes.py", line 62, in script_exec
self.interpreter.run(script_file=script)
File "prompt/interpreter.py", line 278, in run
return run_script(intro=self.__intro_string, local=locals(),
script_file=script_file, quit=self.__quit_flag,
show_script=self.__show_script, raise_relax_error=self.__raise_relax_error)
File "prompt/interpreter.py", line 576, in run_script
return console.interact(intro, local, script_file, quit,
show_script=show_script, raise_relax_error=raise_relax_error)
File "prompt/interpreter.py", line 468, in interact_script
exec_script(script_file, local)
File "prompt/interpreter.py", line 341, in exec_script
runpy.run_module(module, globals)
File "/usr/lib64/python2.7/runpy.py", line 180, in run_module
fname, loader, pkg_name)
File "/usr/lib64/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File
"/mnt/tmpfs/relax-3.1.2/test_suite/system_tests/scripts/model_free/dauvergne_protocol.py",
line 146, in <module>
from auto_analyses.dauvergne_protocol import dAuvergne_protocol
ImportError: No module named dauvergne_protocol
----------------------------------------------------------------------
Ran 351 tests in 559.332s
FAILED (errors=5)
===================================
= Summary of the relax test suite =
===================================
Optional packages/modules
=========================
No tests skipped due to missing modules.
Synopsis
========
System/functional tests
................................................................. [ Failed ]
_______________________________________________________
Reply to this item at:
<http://gna.org/bugs/?21481>
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[bug #21481] System test fail with "ImportError: No module named dauvergne_protocol"