mail[task #7807] Speed-up of dispersion models for Clustered analysis


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Posted by Troels E. Linnet on June 09, 2014 - 00:46:
Follow-up Comment #37, task #7807 (project relax):

10000 iterations
3 frq

BRANCH
1 spin
  ncalls  tottime  percall  cumtime  percall filename:lineno(function)
        1    0.000    0.000    6.718    6.718 <string>:1(<module>)
        1    0.011    0.011    6.718    6.718 pf:419(single)
    10000    0.024    0.000    6.700    0.001 pf:405(calc)
    10000    0.087    0.000    6.676    0.001
relax_disp.py:979(func_CR72_full)
    10000    1.021    0.000    6.531    0.001
relax_disp.py:507(calc_CR72_chi2)
    10003    1.582    0.000    3.633    0.000 cr72.py:101(r2eff_CR72)
   230029    1.873    0.000    1.873    0.000 {numpy.core.multiarray.array}
    40003    1.189    0.000    1.818    0.000 numeric.py:1862(allclose)
    80006    0.064    0.000    0.379    0.000 fromnumeric.py:1579(all)

100 spin
        1    0.000    0.000  196.274  196.274 <string>:1(<module>)
        1    0.022    0.022  196.274  196.274 pf:441(cluster)
    10000    0.038    0.000  196.126    0.020 pf:405(calc)
    10000    0.134    0.000  196.088    0.020
relax_disp.py:979(func_CR72_full)
    10000   65.992    0.007  195.814    0.020
relax_disp.py:507(calc_CR72_chi2)
  9142108  110.027    0.000  110.027    0.000 {numpy.core.multiarray.array}
    10300   12.925    0.001   19.758    0.002 cr72.py:101(r2eff_CR72)
    40300    4.861    0.000    6.205    0.000 numeric.py:1862(allclose)
    80600    0.086    0.000    0.834    0.000 fromnumeric.py:1579(all)


TRUNK
1 spin
  ncalls  tottime  percall  cumtime  percall filename:lineno(function)
        1    0.000    0.000    6.148    6.148 <string>:1(<module>)
        1    0.011    0.011    6.148    6.148 pf:419(single)
    10000    0.026    0.000    6.131    0.001 pf:405(calc)
    10000    0.084    0.000    6.105    0.001
relax_disp.py:908(func_CR72_full)
    10000    0.584    0.000    5.957    0.001
relax_disp.py:456(calc_CR72_chi2)
    30003    4.226    0.000    4.703    0.000 cr72.py:100(r2eff_CR72)
    30000    0.460    0.000    0.625    0.000 chi2.py:32(chi2)
    60003    0.076    0.000    0.332    0.000 fromnumeric.py:1379(sum)
    60003    0.213    0.000    0.213    0.000 {method 'sum' of 'numpy.ndarray'
objects}
    30003    0.029    0.000    0.164    0.000 fromnumeric.py:1774(amax)
    30003    0.026    0.000    0.145    0.000 fromnumeric.py:1836(amin)

100 spin
        1    0.000    0.000  555.044  555.044 <string>:1(<module>)
        1    0.019    0.019  555.044  555.044 pf:441(cluster)
    10000    0.037    0.000  554.929    0.055 pf:405(calc)
    10000    0.111    0.000  554.892    0.055
relax_disp.py:908(func_CR72_full)
    10000   53.336    0.005  554.643    0.055
relax_disp.py:456(calc_CR72_chi2)
  3000300  394.852    0.000  438.738    0.000 cr72.py:100(r2eff_CR72)
  3000000   43.273    0.000   58.745    0.000 chi2.py:32(chi2)
  6000300    7.096    0.000   30.915    0.000 fromnumeric.py:1379(sum)
  6000300   19.794    0.000   19.794    0.000 {method 'sum' of 'numpy.ndarray'
objects}

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