mailRe: r23784 - /trunk/test_suite/system_tests/relax_disp.py


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Posted by Edward d'Auvergne on June 10, 2014 - 16:34:
Hi Troels,

For the relax whitespace conventions, you should remove the spaces
around "=" for all function arguments.  See the 4th point at
http://www.nmr-relax.com/manual/Whitespace.html.  This is also the
standard Python convention and the 2to3 Python version conversion
program will make this change too.

Cheers,

Edward



On 10 June 2014 11:49,  <tlinnet@xxxxxxxxxxxxx> wrote:
Author: tlinnet
Date: Tue Jun 10 11:49:00 2014
New Revision: 23784

URL: http://svn.gna.org/viewcvs/relax?rev=23784&view=rev
Log:
Lowered chi2 value test in system test 
Relax_disp.test_bug_22146_unpacking_r2a_r2b_cluster_NS_STAR.

This is due to the data produced on 32 bit machine, and tested on 64 bit 
machines.
The error was:
AssertionError: 2.4659455670347743e-05 != 0.0 within 7 places

The reason for this is due to truncation artifacts.

Modified:
    trunk/test_suite/system_tests/relax_disp.py

Modified: trunk/test_suite/system_tests/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/test_suite/system_tests/relax_disp.py?rev=23784&r1=23783&r2=23784&view=diff
==============================================================================
--- trunk/test_suite/system_tests/relax_disp.py (original)
+++ trunk/test_suite/system_tests/relax_disp.py Tue Jun 10 11:49:00 2014
@@ -78,7 +78,7 @@
         self.tmpdir = ds.tmpdir


-    def setup_bug_22146_unpacking_r2a_r2b_cluster(self, folder=None, 
model_analyse=None):
+    def setup_bug_22146_unpacking_r2a_r2b_cluster(self, folder=None, 
model_analyse=None, places = 7):
         """Setup data for the catch of U{bug 
#22146<https://gna.org/bugs/?22146>}, the failure of unpacking R2A and R2B, 
when performing a clustered full dispersion models.

         @keyword folder:            The name of the folder for the test 
data.
@@ -231,7 +231,7 @@

             # Test chi2.
             # At this point the chi-squared value at the solution should 
be zero, as the relaxation data was created with the same parameter values.
-            self.assertAlmostEqual(cur_spin.chi2, 0.0)
+            self.assertAlmostEqual(cur_spin.chi2, 0.0, places = places)


     def setup_hansen_cpmg_data(self, model=None):
@@ -1014,7 +1014,7 @@
         """Catch U{bug #22146<https://gna.org/bugs/?22146>}, the failure 
of unpacking R2A and R2B, when performing a clustered NS CPMG 2SITE STAR 
full analysis."""

         # Base data setup.
-        
self.setup_bug_22146_unpacking_r2a_r2b_cluster(folder='ns_cpmg_2site_star_full',
 model_analyse = MODEL_NS_CPMG_2SITE_STAR_FULL)
+        
self.setup_bug_22146_unpacking_r2a_r2b_cluster(folder='ns_cpmg_2site_star_full',
 model_analyse = MODEL_NS_CPMG_2SITE_STAR_FULL, places = 4)


     def test_cpmg_synthetic_ns3d_to_cr72(self):


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