URL:
<http://gna.org/bugs/?22812>
Summary: Failure of the Relax_disp.test_repeat_cpmg system
test with the error "RuntimeError: Could not create write struct".
Project: relax
Submitted by: bugman
Submitted on: Wed 15 Oct 2014 08:00:06 AM UTC
Category: None
Specific analysis category: Relaxation dispersion
Priority: 5 - Normal
Severity: 3 - Normal
Status: None
Assigned to: bugman
Originator Name:
Originator Email:
Open/Closed: Open
Release: 3.3.1
Discussion Lock: Any
Operating System: All systems
_______________________________________________________
Details:
This problem was first reported at
http://www.mail-archive.com/relax-devel@xxxxxxx/msg07023.html. The error seen
in the test suite is:
"""
Error analysis for pipe='MDD_-_setup_-_int_-_126_-_free_spins' and sfr:599.89
=============================================================================
relax> spectrum.error_analysis(subset=['sq_cpmg_0.00059989_0.000_466.667_0',
'sq_cpmg_0.00059989_0.000_0.000_1',
'sq_cpmg_0.00059989_0.000_66.667_2',
'sq_cpmg_0.00059989_0.000_533.333_3',
'sq_cpmg_0.00059989_0.000_1000.000_4',
'sq_cpmg_0.00059989_0.000_33.333_5',
'sq_cpmg_0.00059989_0.000_166.667_6',
'sq_cpmg_0.00059989_0.000_266.667_7',
'sq_cpmg_0.00059989_0.000_133.333_8',
'sq_cpmg_0.00059989_0.000_333.333_9',
'sq_cpmg_0.00059989_0.000_866.667_10',
'sq_cpmg_0.00059989_0.000_300.000_11',
'sq_cpmg_0.00059989_0.000_666.667_12',
'sq_cpmg_0.00059989_0.000_100.000_13',
'sq_cpmg_0.00059989_0.000_200.000_14',
'sq_cpmg_0.00059989_0.000_0.000_15',
'sq_cpmg_0.00059989_0.000_400.000_16',
'sq_cpmg_0.00059989_0.000_233.333_17',
'sq_cpmg_0.00059989_0.000_366.667_18'])
Intensity measure: Peak heights.
Replicated spectra: No.
Spectra ID subset ignored.
relax> results.write(file='MDD_-_setup_-_int_-_126_-_free_spins',
dir='/tmp/tmpApSK0B/setup', compress_type=1, force=False)
Opening the file
'/tmp/tmpApSK0B/setup/MDD_-_setup_-_int_-_126_-_free_spins.bz2' for writing.
Traceback (most recent call last):
File "/data/edau/relax/relax-trunk/test_suite/system_tests/relax_disp.py",
line 6169, in test_repeat_cpmg
RDR.plot_int_corr(corr_data=corr_data, show=False,
write_stats=write_stats)
File "/data/edau/relax/relax-trunk/auto_analyses/relax_disp_repeat_cpmg.py",
line 1302, in plot_int_corr
plt.savefig(png_file_path, bbox_inches='tight')
File "/usr/lib64/python2.7/site-packages/matplotlib/pyplot.py", line 561, in
savefig
return fig.savefig(*args, **kwargs)
File "/usr/lib64/python2.7/site-packages/matplotlib/figure.py", line 1421,
in savefig
self.canvas.print_figure(*args, **kwargs)
File
"/usr/lib64/python2.7/site-packages/matplotlib/backends/backend_qt4agg.py",
line 161, in print_figure
FigureCanvasAgg.print_figure(self, *args, **kwargs)
File "/usr/lib64/python2.7/site-packages/matplotlib/backend_bases.py", line
2167, in print_figure
**kwargs)
File
"/usr/lib64/python2.7/site-packages/matplotlib/backends/backend_agg.py", line
517, in print_png
filename_or_obj, self.figure.dpi)
RuntimeError: Could not create write struct
----------------------------------------------------------------------
"""
_______________________________________________________
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<http://gna.org/bugs/?22812>
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[bug #22812] Failure of the Relax_disp.test_repeat_cpmg system test with the error "RuntimeError: Could not create write struct".