Dear Simon,
Welcome to the relax mailing lists! The problem here is with
Scientific python and not with relax. Maybe there is a newer version
of Scientific python that will work with this 2.6 version of Python?
Or maybe an older. This can be tested by typing in Python:
from Scientific.Visualization import VMD
But note that Scientific python is not essential for relax and can be
uninstalled. Oh, note that I will be soon releasing relax-1.3.4 which
includes many bug fixes and improvements in the next week or so, but
you can start with 1.3.3 nevertheless. I hope this helps.
Regards,
Edward
On Wed, Jul 29, 2009 at 4:25 PM, S W Simon Sham<ssham44@xxxxxxx> wrote:
Hi,
I have a problem on installing 1.3.3 version. I have Fedora 11 linux box
here and all the dependencies were installed.. When I used the pre-compiled
version, there were whole bunch message. Then I installed the src version,
and I got the following "shorter" list of messages:
Traceback (most recent call last):
File "/usr/local/relax-1.3.3/relax", line 38, in <module>
import dep_check
File "/usr/local/relax-1.3.3/dep_check.py", line 111, in <module>
from Scientific.Visualization import VMD # This requires Numeric to
be installed (at least in Scientific 2.7.8).
File "/usr/lib/python2.6/site-packages/Scientific/Visualization/VMD.py",
line 50, in <module>
from Scientific.Geometry import Transformation, Vector, VectorModule
File
"/usr/lib/python2.6/site-packages/Scientific/Geometry/Transformation.py",
line 168
as = -self.tensor.asymmetricalPart()
^
SyntaxError: invalid syntax
Any insight on the problem would be appreciated.
Simon Sham, Ph.D.
NMR Core Facility
933 S. 19th Street
CH19 B30
Phone: 205-934-5696
Email: ssham44@xxxxxxx
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Re: Installation