Hi Sebastien,
The thing is it was not exactly an error of the script. In the line 639 you
have to adjust the script so that it agrees with the format of the function
that you have used in line 174 "Relax_Data=[...". If in line 174 you
describe the data sets with only three parameters (e.g.[Rilabel, freq,
file]) then, in line 639 you have to adapt the function so that the program
reads only three sets of parameters (e.g. relax_data.read(data[0], data[1],
data[2], data[3]) while in the original file was set to read 13.
This is beginners' stuff, but that's exactly what I am with respect to RELAX
and PYTHON, so it may be usefull for other beginners.
However, I still have not managed to run the script to the end. At the
moment I am stuck with yet another error message: AttributeError:
'PipeContainer' object has no attribute 'diff_tensor'
If anyone can help me and avoid that I loose time with this probably easy to
solve error, please do.
Thanks
Tiago P
-----Original Message-----
From: Sébastien Morin [mailto:sebastien.morin.1@xxxxxxxxx]
Sent: quarta-feira, 21 de Outubro de 2009 19:46
To: Tiago Pais
Cc: 'Edward d'Auvergne'; 'Boaz Shapira'; relax-users@xxxxxxx
Subject: Re: Error when running full_analysis.py script
Dear Tiago,
Just for the logs, could you tell us what was the problem ?
Regards,
Sébastien
Tiago Pais wrote:
Ok, managed to solve this already.
Cheers
Tiago
-----Original Message-----
From: relax-users-bounces@xxxxxxx [mailto:relax-users-bounces@xxxxxxx] On
Behalf Of Tiago Pais
Sent: quarta-feira, 21 de Outubro de 2009 15:53
To: 'Edward d'Auvergne'; 'Boaz Shapira'
Cc: relax-users@xxxxxxx
Subject: Error when running full_analysis.py script
Dear all,
I am using 15N relaxation data previously analyzed to test some of the
scripts available in Relax to make sure that I am using it correctly.
However, I get the following error message when running the sample script
full_analysis.py: "List Index out of Range"
Below is "print screen" where the error shows up at the bottom:
"None 149 Q None None
relax> spin.name(spin_id=None, name='N', force=False)
Traceback (most recent call last):
File "/usr/local/bin/relax", line 418, in <module>
Relax()
File "/usr/local/bin/relax", line 127, in __init__
self.interpreter.run(self.script_file)
File "/usr/local/relax/prompt/interpreter.py", line 276, in run
return run_script(intro=self.__intro_string, local=self.local,
script_file=script_file, quit=self.__quit_flag,
show_script=self.__show_script,
raise_relax_error=self.__raise_relax_error)
File "/usr/local/relax/prompt/interpreter.py", line 537, in run_script
return console.interact(intro, local, script_file, quit,
show_script=show_script, raise_relax_error=raise_relax_error)
File "/usr/local/relax/prompt/interpreter.py", line 433, in
interact_script
execfile(script_file, local)
File "full_analysis.py", line 671, in <module>
Main(self.relax)
File "full_analysis.py", line 220, in __init__
self.multi_model(local_tm=True)
File "full_analysis.py", line 639, in multi_model
relax_data.read(data[0], data[1], data[2], data[3], data[4], data[5],
data[6], data[7], data[8], data[9], data[10], data[11],
data[12])
IndexError: list index out of range"
I can't understand if the error relates to the last command listed,
actually
I can't understand the command given in this line (639) - what is it
suppose
to do?
Best regards
TiagoP
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--
Sébastien Morin
PhD Student
S. Gagné NMR Laboratory
Université Laval & PROTEO
Québec, Canada
RE: Error when running full_analysis.py script