mailRe: RelaxFault: RelaxError: Impossible to be here


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Posted by Edward d'Auvergne on February 19, 2013 - 10:59:
Hi James,

Welcome to the relax mailing lists!  The problem you have encountered
has been seen before by Kozo Keisho, see one of the following archived
messages:

http://thread.gmane.org/gmane.science.nmr.relax.user/1347
http://marc.info/?l=relax-users&m=135392228426235&w=2
https://mail.gna.org/public/relax-users/2012-11/msg00017.html
http://www.mail-archive.com/relax-users@xxxxxxx/msg01293.html

These are all the same but you can, for example, respond to old
messages on Gmane.  Note, however, that this has never been reported
as a bug 
(https://gna.org/search/?Search=Search&words=RelaxFault&type_of_search=bugs&only_group_id=1418&exact=1&max_rows=25#options).
 So I have not been able to hunt the problem down and fix it as I was
never able to reproduce the bug.  Would you be able to create a bug
report?  Cheers.

Some useful information for the bug report would be the error message
and the output of 'relax --info'.  The link to submit is
https://gna.org/bugs/?func=additem&group=relax.  I was curious though,
do you see models m0 or m9 being selected?  I'll ask more questions
once a bug report is opened.

Cheers,

Edward



On 18 February 2013 15:33, James Tolchard (CHE) <J.Tolchard@xxxxxxxxx> wrote:
Dear relax team,

I am currently trying to carry out a fully automated model free calculation 
in the relax gui with R1, R2 and hnOE at two fields - all of which were 
calculated in relax. The calculation ends with what I think are sensible 
results but also generates the  error below (including debugging). This 
occurred in relax 2.1.2 and still occurs, exactly the same, in relax 2.2.2. 
The error says that I should submit a bug report, but I thought I would ask 
here first for any advice or clues as to what is going wrong.


Many thanks,

James.




debug> Observer: 'auto_analyses' notifying the 'controller' method 
update_controller().
debug> Execution lock:  Release by 'mf (Fri Feb 15 12:07:59 2013)' 
('auto-analysis' mode).
debug> Observer: 'exec_lock' notifying the 'controller' method 
update_gauge().
debug> Observer: 'exec_lock' notifying the 'gui' method enab().
debug> Observer: 'exec_lock' notifying the 'mf (Fri Feb 15 12:07:59 2013)' 
method activate().
Exception raised in thread.

Traceback (most recent call last):
  File "/SOFTWARE/relax/relax-2.2.2/gui/analyses/execute.py", line 87, in 
run
    self.run_analysis()
  File "/SOFTWARE/relax/relax-2.2.2/gui/analyses/auto_model_free.py", line 
808, in run_analysis
    dauvergne_protocol.dAuvergne_protocol(pipe_name=self.data.pipe_name, 
pipe_bundle=self.data.pipe_bundle, results_dir=self.data.save_dir, 
diff_model=self.data.global_models, mf_models=self.data.mf_models, 
local_tm_models=self.data.local_tm_models, grid_inc=self.data.inc, 
diff_tensor_grid_inc=self.data.diff_tensor_grid_inc, 
mc_sim_num=self.data.mc_sim_num, max_iter=self.data.max_iter, 
conv_loop=self.data.conv_loop)
  File "/SOFTWARE/relax/relax-2.2.2/auto_analyses/dauvergne_protocol.py", 
line 234, in __init__
    self.execute()
  File "/SOFTWARE/relax/relax-2.2.2/auto_analyses/dauvergne_protocol.py", 
line 745, in execute
    self.write_results()
  File "/SOFTWARE/relax/relax-2.2.2/auto_analyses/dauvergne_protocol.py", 
line 911, in write_results
    self.interpreter.pymol.macro_write(data_type='amp_fast',  dir=dir, 
force=True)
  File "/SOFTWARE/relax/relax-2.2.2/prompt/uf_objects.py", line 219, in 
__call__
    self._backend(*new_args, **uf_kargs)
  File "/SOFTWARE/relax/relax-2.2.2/generic_fns/pymol_control.py", line 
504, in macro_write
    commands = create_macro(data_type=data_type, style=style, 
colour_start=colour_start, colour_end=colour_end, colour_list=colour_list)
  File "/SOFTWARE/relax/relax-2.2.2/generic_fns/pymol_control.py", line 
358, in create_macro
    commands = macro(data_type, style, colour_start, colour_end, 
colour_list)
  File "/SOFTWARE/relax/relax-2.2.2/specific_fns/model_free/macro_base.py", 
line 499, in create_macro
    self.classic_style(data_type, colour_start, colour_end, colour_list, 
spin_id)
  File "/SOFTWARE/relax/relax-2.2.2/specific_fns/model_free/macro_base.py", 
line 179, in classic_style
    raise RelaxFault


Storing the relax state in the file 'relax_state_20130216_160517.bz2'.


debug> Observer: 'gui_uf' registering the 'results viewer' method refresh().
debug> Observer: 'pipe_alteration' registering the 'results viewer' method 
refresh().
debug> Observer: 'result_file' registering the 'results viewer' method 
refresh().
debug> Observer: 'exec_lock' registering the 'results viewer' method 
activate().
debug> Lock 'pipe_lock':  Acquisition by 'results viewer window'.
debug> Lock 'pipe_lock':  Release by 'results viewer window'.
RelaxFault: RelaxError: Impossible to be here, please re-run relax with the 
'--debug' flag and summit a bug report at https://gna.org/projects/relax/.


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