mailR1rho RD analysis


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Posted by pma on May 19, 2014 - 16:25:
Hi, all,

Did anybody manage to fit the R1rho relaxation dispersion from some calculated R2 data (e.g. I fitted the different relax_delay time to extract R1rho, then calculate R2 = R1rho/sin^2 - R1/tan^2 )

I found a tutorial on wiki, but it stopped after processing the spectra, actually I finished this part already. Besides,in the manual for R1rho calc (page 173 in the manual) in the R2eff model, it defined R1rho(w1)=-1/T*ln(I1(w1)/I0), e.g. it assume the mono-dispersion between time 0 and a fix time point. We did a bit different, we recorded a series of time points and got the R1rho for each w1.

Now I have all the R2s, I want to use the implemented R1rho models to fit my data.

I think relax should be possible to do the fitting with custom calculated R2, what kind of format should I use? Can anyone show an example of import file and the processing scripts? Then I could reformat my data to the template format.

Now my data looks like the following: for each RF_frq the R2 has such format

res_num    w1(Hz)    value    error
           1    1200 30.7734534261 2.68087025208
           1    2000 23.0503960923 1.53567705225
            ...................


Thanks a lot!

Peixiang

On 05/16/2014 02:18 PM, relax-users-request@xxxxxxx wrote:
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