Re: relax-users Digest, Vol 116, Issue 38 -- October 29, 2016 - 23:45

Hi Edward,

I was reading the theory on model free within the manual and I had a quick
question. The d'Auvergne protocol, is that the model-free analysis in
reverse with the universal solution? Or is that the model-free models with
only the AIC model selection (no universal solution). Both methods were
under the new-protocol section, so I was confused a bit as to which one the
d'Auvergne protocol is running.

Sincerely,
Sam

On Thu, Oct 27, 2016 at 1:34 AM, Edward d'Auvergne <edward@xxxxxxxxxxxxx>
wrote:

> On 4 October 2016 at 23:23, Mahdi, Sam <sam.mahdi.846@xxxxxxxxxxx> wrote:
> > Hi Edward,
> >
> > Just wanted to update you on the status of my runs. I had 2 potential
> dimer
> > structures. I ran Chain A and B for one of them, and Chain B for the
> other.
> > All the results were all very similar. There was missing data though
> > throughout (i.e. I had data for some residues for Chain A that had no
> data
> > in Chain B, Or chain A for one pdb file and Chain B for the other pdb
> file
> > would have data, but Chain B for the other pdb file wouldn't). The data
> that
> > is there for all 3 though does make sense. Thank you so much for your
> help
>
> You're welcome!  Thanks too to Troels and Gary for answering most of
> your questions.
>
> Regards,
>
> Edward