Class Molmol

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Instance Methods

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__init__(self, relax)

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clear_history(self)
Function for clearing the Molmol command history.

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command(self, command)
Function for executing a user supplied Molmol command.

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view(self, run=None)
Function for viewing the collection of molecules extracted from the PDB file.

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Method Details

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command(self, command)

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Function for executing a user supplied Molmol command.

Example
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relax> molmol.command("InitAll yes")

view(self, run=None)

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Function for viewing the collection of molecules extracted from the PDB file.

Keyword Arguments
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run:  The name of the run which the PDB belongs to.


Example
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relax> molmol.view('m1')
relax> molmol.view(run='pdb')