mailr2704 - /branches/tensor_pdb/generic_fns/pymol.py


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Posted by edward . dauvergne on October 30, 2006 - 08:23:
Author: bugman
Date: Mon Oct 30 08:23:19 2006
New Revision: 2704

URL: http://svn.gna.org/viewcvs/relax?rev=2704&view=rev
Log:
Added the '-K' option to the PyMOL pipe to prevent it from terminating when 
the script does.

The problem of the non-persistent PyMOL pipe was discusssed at
https://mail.gna.org/public/relax-devel/2006-10/msg00168.html (Message-id:
<7f080ed10610290135p7ebce039tda7cd622b7ca30ff@xxxxxxxxxxxxxx>) and
https://mail.gna.org/public/relax-devel/2006-10/msg00169.html (Message-id:
<BA58D16C-56EF-4AC3-B415-34A87A0B7FAB@xxxxxxxxx>).

The solution came from 'DeLano Scientific'.  The details can be seen in my 
post at
http://sourceforge.net/mailarchive/message.php?msg_id=37186991 and the 
responses within the thread
located at 
http://sourceforge.net/mailarchive/forum.php?thread_id=30844748&forum_id=60.


Modified:
    branches/tensor_pdb/generic_fns/pymol.py

Modified: branches/tensor_pdb/generic_fns/pymol.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/tensor_pdb/generic_fns/pymol.py?rev=2704&r1=2703&r2=2704&view=diff
==============================================================================
--- branches/tensor_pdb/generic_fns/pymol.py (original)
+++ branches/tensor_pdb/generic_fns/pymol.py Mon Oct 30 08:23:19 2006
@@ -119,7 +119,7 @@
         self.relax.IO.test_binary('pymol')
 
         # Open the PyMOL pipe.
-        self.relax.data.pymol = popen("pymol -qp", 'w', 0)
+        self.relax.data.pymol = popen("pymol -qpK", 'w', 0)
 
         # Execute the command history.
         if len(self.command_history) > 0:




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