mailr4291 - in /1.3: relax_errors.py specific_fns/jw_mapping.py test_suite/unit_tests/value_testing_base.py


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Posted by edward on January 03, 2008 - 18:31:
Author: bugman
Date: Thu Jan  3 18:19:58 2008
New Revision: 4291

URL: http://svn.gna.org/viewcvs/relax?rev=4291&view=rev
Log:
Bug fix for the jw mapping parameter setting function 
specific_fns.jw_mapping.set().

The J(w) parameters do not have default values and now a new RelaxError, 
RelaxParamSetError, is
raised if these params are set.  All the relevent unit tests have been 
updated for this change.


Modified:
    1.3/relax_errors.py
    1.3/specific_fns/jw_mapping.py
    1.3/test_suite/unit_tests/value_testing_base.py

Modified: 1.3/relax_errors.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/relax_errors.py?rev=4291&r1=4290&r2=4291&view=diff
==============================================================================
--- 1.3/relax_errors.py (original)
+++ 1.3/relax_errors.py Thu Jan  3 18:19:58 2008
@@ -611,6 +611,16 @@
 # Data type errors.
 ###################
 
+# Parameter cannot be set.
+class RelaxParamSetError(BaseError):
+    def __init__(self, name, param_type=None):
+        if param_type != None:
+            self.text = "The " + name + " parameter, " + `param_type` + ", 
cannot be set."
+        else:
+            self.text = "The " + name + " parameter cannot be set."
+        if Debug:
+            self.save_state()
+
 # Value already exists.
 class RelaxValueError(BaseError):
     def __init__(self, data_type, pipe):

Modified: 1.3/specific_fns/jw_mapping.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/specific_fns/jw_mapping.py?rev=4291&r1=4290&r2=4291&view=diff
==============================================================================
--- 1.3/specific_fns/jw_mapping.py (original)
+++ 1.3/specific_fns/jw_mapping.py Thu Jan  3 18:19:58 2008
@@ -28,7 +28,7 @@
 from data import Data as relax_data_store
 from base_class import Common_functions
 from maths_fns.jw_mapping import Mapping
-from relax_errors import RelaxError, RelaxFuncSetupError, RelaxNoPipeError, 
RelaxNoSequenceError, RelaxNoValueError, RelaxNucleusError
+from relax_errors import RelaxError, RelaxFuncSetupError, RelaxNoPipeError, 
RelaxNoSequenceError, RelaxNoValueError, RelaxNucleusError, RelaxParamSetError
 from physical_constants import N15_CSA, NH_BOND_LENGTH
 
 
@@ -418,6 +418,10 @@
             if value == None:
                 value = self.default_value(object_name)
 
+            # No default value, hence the parameter cannot be set.
+            if value == None:
+                raise RelaxParamSetError, param
+
             # Set the value.
             setattr(spin, object_name, float(value))
 

Modified: 1.3/test_suite/unit_tests/value_testing_base.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/test_suite/unit_tests/value_testing_base.py?rev=4291&r1=4290&r2=4291&view=diff
==============================================================================
--- 1.3/test_suite/unit_tests/value_testing_base.py (original)
+++ 1.3/test_suite/unit_tests/value_testing_base.py Thu Jan  3 18:19:58 2008
@@ -26,7 +26,7 @@
 # relax module imports.
 from data import Data as relax_data_store
 from generic_fns import diffusion_tensor
-from relax_errors import RelaxError, RelaxUnknownParamCombError
+from relax_errors import RelaxError, RelaxParamSetError, 
RelaxUnknownParamCombError
 
 
 
@@ -1433,11 +1433,7 @@
         cdp = relax_data_store[relax_data_store.current_pipe]
 
         # Set the parameter.
-        self.value_fns.set(param='j0')
-
-        # Test the parameter.
-        self.assertEqual(cdp.mol[0].res[0].spin[0].j0, 4.5e-9)
-        self.assertEqual(cdp.mol[0].res[1].spin[0].j0, 4.5e-9)
+        self.assertRaises(RelaxParamSetError, self.value_fns.set, param='j0')
 
 
     def test_set_jw_defaults_jwx(self):
@@ -1453,11 +1449,7 @@
         cdp = relax_data_store[relax_data_store.current_pipe]
 
         # Set the parameter.
-        self.value_fns.set(param='jwx')
-
-        # Test the parameter.
-        self.assertEqual(cdp.mol[0].res[0].spin[0].jwx, 2.3e-10)
-        self.assertEqual(cdp.mol[0].res[1].spin[0].jwx, 2.3e-10)
+        self.assertRaises(RelaxParamSetError, self.value_fns.set, 
param='jwx')
 
 
     def test_set_jw_defaults_jwh(self):
@@ -1473,11 +1465,7 @@
         cdp = relax_data_store[relax_data_store.current_pipe]
 
         # Set the parameter.
-        self.value_fns.set(param='J(wH)')
-
-        # Test the parameter.
-        self.assertEqual(cdp.mol[0].res[0].spin[0].jwh, 1.7e-12)
-        self.assertEqual(cdp.mol[0].res[1].spin[0].jwh, 1.7e-12)
+        self.assertRaises(RelaxParamSetError, self.value_fns.set, 
param='J(wH)')
 
 
     def test_set_jw_defaults_r(self):
@@ -1533,15 +1521,7 @@
         cdp = relax_data_store[relax_data_store.current_pipe]
 
         # Set the parameter.
-        self.value_fns.set(param=['J(0)', 'jwx', 'J(wH)'])
-
-        # Test the parameter.
-        self.assertEqual(cdp.mol[0].res[0].spin[0].j0, 6.4e-9)
-        self.assertEqual(cdp.mol[0].res[0].spin[0].jwx, 3.5e-10)
-        self.assertEqual(cdp.mol[0].res[0].spin[0].jwh, 2.3e-12)
-        self.assertEqual(cdp.mol[0].res[1].spin[0].j0, 6.4e-9)
-        self.assertEqual(cdp.mol[0].res[1].spin[0].jwx, 3.5e-10)
-        self.assertEqual(cdp.mol[0].res[1].spin[0].jwh, 2.3e-12)
+        self.assertRaises(RelaxParamSetError, self.value_fns.set, 
param=['J(0)', 'jwx', 'J(wH)'])
 
 
     def test_set_jw_single_spin_j0(self):




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