r18885 - /trunk/generic_fns/structure/internal.py -- March 19, 2013 - 16:24

Author: bugman
Date: Tue Mar 19 16:24:02 2013
New Revision: 18885

URL: http://svn.gna.org/viewcvs/relax?rev=18885&view=rev
Log:
Fixes for the helix metadata deletion for the internal structural object.

This affects the structure.delete user function.


Modified:
    trunk/generic_fns/structure/internal.py

Modified: trunk/generic_fns/structure/internal.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/generic_fns/structure/internal.py?rev=18885&r1=18884&r2=18885&view=diff
==============================================================================
--- trunk/generic_fns/structure/internal.py (original)
+++ trunk/generic_fns/structure/internal.py Tue Mar 19 16:24:02 2013
@@ -1373,17 +1373,22 @@
                         mol.element.pop(i)
                         mol.pdb_record.pop(i)
                         mol.res_name.pop(i)
-                        del_res_nums.append(mol.res_num.pop(i))
+                        res_num = mol.res_num.pop(i)
                         mol.seg_id.pop(i)
                         mol.x.pop(i)
                         mol.y.pop(i)
                         mol.z.pop(i)
 
+                        # The residue no longer exists.
+                        if res_num not in mol.res_num and res_num not in 
del_res_nums:
+                            del_res_nums.append(res_num)
+
             # Nothing more to do.
             if not len(del_res_nums):
                 return
 
             # Handle the helix metadata.
+            del_res_nums.reverse()
             del_helix_indices = []
             for i in range(len(self.helices)):
                 # Trim the helix.