Author: bugman Date: Sun Mar 24 20:33:09 2013 New Revision: 19144 URL: http://svn.gna.org/viewcvs/relax?rev=19144&view=rev Log: Fixed some name classes in the namespace of pipe_control.structure.mass. Modified: trunk/pipe_control/structure/mass.py Modified: trunk/pipe_control/structure/mass.py URL: http://svn.gna.org/viewcvs/relax/trunk/pipe_control/structure/mass.py?rev=19144&r1=19143&r2=19144&view=diff ============================================================================== --- trunk/pipe_control/structure/mass.py (original) +++ trunk/pipe_control/structure/mass.py Sun Mar 24 20:33:09 2013 @@ -25,13 +25,13 @@ # relax module imports. from pipe_control.mol_res_spin import return_molecule, return_residue, return_spin from lib.errors import RelaxNoPdbError -from lib.structure import mass +from lib.structure.mass import centre_of_mass from lib.warnings import RelaxWarning -def centre_of_mass(atom_id=None, model=None, return_mass=False, verbosity=1): - """Calculate and return the centre of mass of the structure. +def pipe_centre_of_mass(atom_id=None, model=None, return_mass=False, verbosity=1): + """Calculate and return the centre of mass of the structures in the current data pipe. @keyword atom_id: The molecule, residue, and atom identifier string. Only atoms matching this selection will be used. @type atom_id: str or None @@ -91,7 +91,7 @@ element_list.append(element) # Calculate the CoM. - com, mass = mass.centre_of_mass(pos=coord, elements=element_list) + com, mass = centre_of_mass(pos=coord, elements=element_list) # Return the centre of mass. if return_mass: