mailr21073 - /branches/relax_disp/gui/analyses/auto_relax_disp.py


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Posted by edward on October 11, 2013 - 15:11:
Author: bugman
Date: Fri Oct 11 15:11:19 2013
New Revision: 21073

URL: http://svn.gna.org/viewcvs/relax?rev=21073&view=rev
Log:
Added the 'MQ NS CPMG 2-site' model to the GUI model list.

This is the 2-site numeric solution for multi-quantum CPMG-type data.

This follows the tutorial for adding relaxation dispersion models at:
http://wiki.nmr-relax.com/Tutorial_for_adding_relaxation_dispersion_models_to_relax#The_GUI.


Modified:
    branches/relax_disp/gui/analyses/auto_relax_disp.py

Modified: branches/relax_disp/gui/analyses/auto_relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/gui/analyses/auto_relax_disp.py?rev=21073&r1=21072&r2=21073&view=diff
==============================================================================
--- branches/relax_disp/gui/analyses/auto_relax_disp.py (original)
+++ branches/relax_disp/gui/analyses/auto_relax_disp.py Fri Oct 11 15:11:19 
2013
@@ -44,11 +44,11 @@
 from gui.string_conv import gui_to_bool, gui_to_int, gui_to_str, str_to_gui
 from gui.uf_objects import Uf_storage; uf_store = Uf_storage()
 from gui.wizards.peak_intensity import Peak_intensity_wizard
-from lib.text.gui import dw, i0, kex, padw2, phi_ex, phi_exB, phi_exC, r1, 
r1rho, r1rho_prime, r2, r2a, r2b, r2eff
+from lib.text.gui import dw, dwH, i0, kex, padw2, phi_ex, phi_exB, phi_exC, 
r1, r1rho, r1rho_prime, r2, r2a, r2b, r2eff
 from pipe_control.mol_res_spin import exists_mol_res_spin_data, spin_loop
 from pipe_control.pipes import has_bundle, has_pipe
 from specific_analyses.relax_disp.disp_data import has_cpmg_exp_type, 
has_r1rho_exp_type
-from specific_analyses.relax_disp.variables import MODEL_CR72, 
MODEL_CR72_FULL, MODEL_DPL94, MODEL_IT99, MODEL_LIST_CPMG, MODEL_LIST_R1RHO, 
MODEL_LM63, MODEL_LM63_3SITE, MODEL_M61, MODEL_M61B, MODEL_NOREX, 
MODEL_NS_CPMG_2SITE_3D, MODEL_NS_CPMG_2SITE_3D_FULL, 
MODEL_NS_CPMG_2SITE_EXPANDED, MODEL_NS_CPMG_2SITE_STAR, 
MODEL_NS_CPMG_2SITE_STAR_FULL, MODEL_NS_R1RHO_2SITE, MODEL_R2EFF, MODEL_TP02, 
MODEL_TSMFK01
+from specific_analyses.relax_disp.variables import MODEL_CR72, 
MODEL_CR72_FULL, MODEL_DPL94, MODEL_IT99, MODEL_LIST_CPMG, MODEL_LIST_R1RHO, 
MODEL_LM63, MODEL_LM63_3SITE, MODEL_M61, MODEL_M61B, MODEL_MQ_NS_CPMG_2SITE, 
MODEL_NOREX, MODEL_NS_CPMG_2SITE_3D, MODEL_NS_CPMG_2SITE_3D_FULL, 
MODEL_NS_CPMG_2SITE_EXPANDED, MODEL_NS_CPMG_2SITE_STAR, 
MODEL_NS_CPMG_2SITE_STAR_FULL, MODEL_NS_R1RHO_2SITE, MODEL_R2EFF, MODEL_TP02, 
MODEL_TSMFK01
 from status import Status; status = Status()
 
 
@@ -669,7 +669,9 @@
         MODEL_M61B,
         MODEL_DPL94,
         MODEL_TP02,
-        MODEL_NS_R1RHO_2SITE
+        MODEL_NS_R1RHO_2SITE,
+        None,
+        MODEL_MQ_NS_CPMG_2SITE
     ]
     params = [
         "{%s/%s, %s}" % (r2eff, r1rho, i0),
@@ -692,7 +694,9 @@
         "{%s, ..., pA, %s, %s}" % (r1rho_prime, dw, kex),
         "{%s, ..., %s, %s}" % (r1rho_prime, phi_ex, kex),
         "{%s, ..., pA, %s, %s}" % (r1rho_prime, dw, kex),
-        "{%s, ..., pA, %s, %s}" % (r1rho_prime, dw, kex)
+        "{%s, ..., pA, %s, %s}" % (r1rho_prime, dw, kex),
+        None,
+        "{%s, ..., pA, %s, %s, %s}" % (r2, dw, dwH, kex),
     ]
     model_desc = [
         "The base model for determining the %s/%s values and errors for all 
other models." % (r2eff, r1rho),
@@ -715,7 +719,9 @@
         "The Meiboom (1961) 2-site equation for all time scales with pA >> 
pB.",
         "The Davis, Perlman and London (1994) 2-site fast exchange 
equation.",
         "The Trott and Palmer (2002) 2-site equation for all time scales.",
-        "The 2-site numerical solution using 3D magnetisation vectors."
+        "The 2-site numerical solution using 3D magnetisation vectors.",
+        None,
+        "The 2-site numerical solution of Korzhnev et al. (2004) from 
multi-quantum CPMG data."
     ]
     tooltip = "The list of all relaxation dispersion models to be optimised 
as part of the protocol."
     tooltip_button = "Open the model list selector window."




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