Author: bugman
Date: Mon Nov 4 11:13:35 2013
New Revision: 21371
URL: http://svn.gna.org/viewcvs/relax?rev=21371&view=rev
Log:
Added Dmitry Korzhnev's cpmg_fit software to the dispersion chapter of the
manual.
This is in the last section of that chapter and in the software comparison
table.
Modified:
branches/relax_disp/docs/latex/dispersion.tex
branches/relax_disp/docs/latex/dispersion_software.tex
Modified: branches/relax_disp/docs/latex/dispersion.tex
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/docs/latex/dispersion.tex?rev=21371&r1=21370&r2=21371&view=diff
==============================================================================
--- branches/relax_disp/docs/latex/dispersion.tex (original)
+++ branches/relax_disp/docs/latex/dispersion.tex Mon Nov 4 11:13:35 2013
@@ -1330,6 +1330,7 @@
\begin{description}
\item[CPMGFit] Art Palmer's original dispersion analysis software at
\url{http://www.palmer.hs.columbia.edu/software/cpmgfit.html}.
+\item[cpmg\_fit] Dmitry Korzhnev's dispersion software available upon
request.
\item[CATIA] Flemming Hansen's dispersion software at
\url{http://www.biochem.ucl.ac.uk/hansen/catia/}. The reference is
\citet{Hansen08}.
\item[NESSY] Michael Bieri's dispersion software at
\url{http://home.gna.org/nessy/}. The reference is \citet{BieriGooley11}.
\item[GUARDD] Ian Kleckner's dispersion software at
\url{http://code.google.com/p/guardd/}. The reference is
\citet{KlecknerFoster12}.
Modified: branches/relax_disp/docs/latex/dispersion_software.tex
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/docs/latex/dispersion_software.tex?rev=21371&r1=21370&r2=21371&view=diff
==============================================================================
--- branches/relax_disp/docs/latex/dispersion_software.tex (original)
+++ branches/relax_disp/docs/latex/dispersion_software.tex Mon Nov 4
11:13:35 2013
@@ -5,7 +5,7 @@
\setlength\LTcapwidth{\textwidth}
\setlength\LTleft{0pt}
\setlength\LTright{0pt}
-\begin{longtable}{l@{\extracolsep{\fill}}ccccccc}
+\begin{longtable}{l@{\extracolsep{\fill}}cccccccc}
% Caption.
\caption[Dispersion software comparison.]{Comparison of the features for the
different dispersion software.}
@@ -15,7 +15,7 @@
\\
\toprule
\vspace{25pt} \\
- & \begin{rotate}{45}CPMGFit\end{rotate} &
\begin{rotate}{45}CATIA\end{rotate} & \begin{rotate}{45}NESSY\end{rotate} &
\begin{rotate}{45}GUARDD\end{rotate} &
\begin{rotate}{45}ShereKhan\end{rotate} & \begin{rotate}{45}GLOVE\end{rotate}
& \begin{rotate}{45}relax\end{rotate} \hspace{5pt} \\
+ & \begin{rotate}{45}CPMGFit\end{rotate} &
\begin{rotate}{45}cpmg\_fit\end{rotate} & \begin{rotate}{45}CATIA\end{rotate}
& \begin{rotate}{45}NESSY\end{rotate} & \begin{rotate}{45}GUARDD\end{rotate}
& \begin{rotate}{45}ShereKhan\end{rotate} &
\begin{rotate}{45}GLOVE\end{rotate} & \begin{rotate}{45}relax\end{rotate}
\hspace{5pt} \\
% & CPMGFit & CATIA & NESSY & GUARDD & ShereKhan & GLOVE & relax \\
\midrule
\endhead
@@ -36,53 +36,53 @@
\vspace{-5pt} \\
Base models \\
\cmidrule(lr){1-1}
-$\Rtwoeff/\Ronerhoprime$ & \no & \no & \yes & \yes & \yes & \yes & \yes
\\
-No Rex & \no & \no & \yes & \no & \no & \yes & \yes
\\
+$\Rtwoeff/\Ronerhoprime$ & \no & \no & \no & \yes & \yes & \yes & \yes
& \yes \\
+No Rex & \no & \yes & \no & \yes & \no & \no & \yes
& \yes \\
\vspace{-5pt} \\
Single quantum (SQ) CPMG-type \\
\cmidrule(lr){1-1}
-LM63 & \yes & \no & \yes & \no & \yes & \yes & \yes
\\
-LM63 3-site & \yes & \no & \yes & \no & \no & \no & \yes
\\
-CR72 & \yes & \no & \yes & \no & \yes & \yes & \yes
\\
-IT99 & \yes & \no & \no & \no & \no & \yes & \yes
\\
-TSMFK01 & \no & \no & \no & \no & \no & \no & \yes
\\
-NS 2-site & \no & \yes & \no & \no & \yes & \no & \yes
\\
+LM63 & \yes & \no & \no & \yes & \no & \yes & \yes
& \yes \\
+LM63 3-site & \yes & \no & \no & \yes & \no & \no & \no
& \yes \\
+CR72 & \yes & \yes & \no & \yes & \no & \yes & \yes
& \yes \\
+IT99 & \yes & \no & \no & \no & \no & \no & \yes
& \yes \\
+TSMFK01 & \no & \no & \no & \no & \no & \no & \no
& \yes \\
+NS 2-site & \no & \yes & \yes & \no & \no & \yes & \no
& \yes \\
\vspace{-5pt} \\
Multiple quantum (MQ) CPMG-type \\
\cmidrule(lr){1-1}
-MQ CR72 & \no & \no & \no & \yes & \no & \yes & \yes
\\
+MQ CR72 & \no & \yes & \no & \no & \yes & \no & \yes
& \yes \\
\vspace{-5pt} \\
MMQ (SQ, ZQ, DQ, \& MQ) CPMG-type \\
\cmidrule(lr){1-1}
-NS 2-site & \no & \no & \no & \no & \no & \no & \yes
\\
-NS 3-site (linear) & \no & \no & \no & \no & \no & \no & \no
\\
-NS 3-site (branched) & \no & \no & \no & \no & \no & \no & \no
\\
+NS 2-site & \no & \yes & \no & \no & \no & \no & \no
& \yes \\
+NS 3-site (linear) & \no & \yes & \no & \no & \no & \no & \no
& \no \\
+NS 3-site (branched) & \no & \yes & \no & \no & \no & \no & \no
& \no \\
\vspace{-5pt} \\
$\Ronerho$-type \\
\cmidrule(lr){1-1}
-M61 & \no & \no & \no & \no & \no & \no & \yes
\\
-DPL94 & \no & \no & \no & \no & \no & \no & \yes
\\
-TP02 & \no & \no & \no & \no & \no & \no & \yes
\\
-NS 2-site & \no & \no & \no & \no & \no & \no & \yes
\\
-NS 3-site (linear) & \no & \no & \no & \no & \no & \no & \no
\\
-NS 3-site (branched) & \no & \no & \no & \no & \no & \no & \no
\\
+M61 & \no & \no & \no & \no & \no & \no & \no
& \yes \\
+DPL94 & \no & \no & \no & \no & \no & \no & \no
& \yes \\
+TP02 & \no & \yes & \no & \no & \no & \no & \no
& \yes \\
+NS 2-site & \no & \yes & \no & \no & \no & \no & \no
& \yes \\
+NS 3-site (linear) & \no & \yes & \no & \no & \no & \no & \no
& \no \\
+NS 3-site (branched) & \no & \yes & \no & \no & \no & \no & \no
& \no \\
\midrule
\vspace{-5pt} \\
\textbf{General features} \\
\cmidrule(lr){1-1}
-Graphical user interface (GUI) & \no & \no & \yes & \yes
& \no & \no & \yes \\
-Web user interface (Web UI) & \no & \no & \no & \no
& \yes & \no & \no \\
-Scripting user interface (Script UI) & \no & \yes & \no & \no
& \yes & \yes & \yes \\
-Parallelisation via MPI for running on clusters & \no & \no & \no & \no
& \no & \no & \yes \\
-Off-resonance effects (CPMG-type data) & \no & \yes & \no & \no
& \no & \no & \no \\
-Off-resonance effects ($\Ronerho$-type data) & \no & \no & \no & \no
& \no & \no & \yes \\
-Van't Hoff analysis & \no & \no & \yes & \no
& \no & \no & \no \\
-ZZ exchange & \no & \no & \no & \no
& \no & \no & \no \\
-HD exchange & \no & \no & \no & \no
& \no & \no & \no \\
+Graphical user interface (GUI) & \no & \no & \no & \yes
& \yes & \no & \no & \yes \\
+Web user interface (Web UI) & \no & \no & \no & \no
& \no & \yes & \no & \no \\
+Scripting user interface (Script UI) & \no & \no & \yes & \no
& \no & \yes & \yes & \yes \\
+Parallelisation via MPI for running on clusters & \no & \no & \no & \no
& \no & \no & \no & \yes \\
+Off-resonance effects (CPMG-type data) & \no & \no & \yes & \no
& \no & \no & \no & \no \\
+Off-resonance effects ($\Ronerho$-type data) & \no & \yes & \no & \no
& \no & \no & \no & \yes \\
+Van't Hoff analysis & \no & \no & \no & \yes
& \no & \no & \no & \no \\
+ZZ exchange & \no & \no & \no & \no
& \no & \no & \no & \no \\
+HD exchange & \no & \no & \no & \no
& \no & \no & \no & \no \\
\end{longtable}
\end{small}
\end{center}
r21371 - in /branches/relax_disp/docs/latex: dispersion.tex dispersion_software.tex