Author: bugman
Date: Tue Feb 25 18:55:25 2014
New Revision: 22319
URL: http://svn.gna.org/viewcvs/relax?rev=22319&view=rev
Log:
Fixes for some incorrectly reported results in the dispersion GUI tutorial in
the manual.
The non-clustered results had been incorrectly copied from the log messages.
Modified:
trunk/docs/latex/dispersion.tex
Modified: trunk/docs/latex/dispersion.tex
URL:
http://svn.gna.org/viewcvs/relax/trunk/docs/latex/dispersion.tex?rev=22319&r1=22318&r2=22319&view=diff
==============================================================================
--- trunk/docs/latex/dispersion.tex (original)
+++ trunk/docs/latex/dispersion.tex Tue Feb 25 18:55:25 2014
@@ -3434,70 +3434,70 @@
\begin{lstlisting}[basicstyle=\ttfamily
\tiny,language=relax_log,numbers=none]
The spin cluster [':59@N'].
# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
31 1886.14016 1890.14016
-CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 32.15110 42.15110
-NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 32.61624 42.61624
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
30 1577.42286 1581.42286
+CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 31.48415 41.48415
+NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 31.84758 41.84758
The model from the data pipe 'CR72 - relax_disp (Mon Feb 17 18:00:16 2014)'
has been selected.
The spin cluster [':60@N'].
-# Data pipe Num_params_(k)
Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2 31
3240.49312 3244.49312
+# Data pipe Num_params_(k)
Num_data_sets_(n) Chi2 Criterion
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2 30
2647.97449 2651.97449
The model from the data pipe 'No Rex - relax_disp (Mon Feb 17 18:00:16
2014)' has been selected.
The spin cluster [':61@N'].
# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
31 17285.66217 17289.66217
-CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 95.95234 105.95234
-NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 92.56628 102.56628
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
30 15019.24382 15023.24382
+CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 77.50622 87.50622
+NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 74.73334 84.73334
The model from the data pipe 'NS CPMG 2-site expanded - relax_disp (Mon Feb
17 18:00:16 2014)' has been selected.
The spin cluster [':62@N'].
# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
31 851.74421 855.74421
-NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 31.48142 41.48142
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
30 722.91592 726.91592
+NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 30.11618 40.11618
The model from the data pipe 'NS CPMG 2-site expanded - relax_disp (Mon Feb
17 18:00:16 2014)' has been selected.
The spin cluster [':63@N'].
# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
31 6452.87623 6456.87623
-CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 61.70881 71.70881
-NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 63.14294 73.14294
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
30 5455.72135 5459.72135
+CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 58.56731 68.56731
+NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 59.90738 69.90738
The model from the data pipe 'CR72 - relax_disp (Mon Feb 17 18:00:16 2014)'
has been selected.
The spin cluster [':64@N'].
# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
31 16028.66123 16032.66123
-CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 29.25973 39.25973
-NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 30.24274 40.24274
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
30 13736.91051 13740.91051
+CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 28.66223 38.66223
+NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 29.54008 39.54008
The model from the data pipe 'CR72 - relax_disp (Mon Feb 17 18:00:16 2014)'
has been selected.
The spin cluster [':65@N'].
# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
31 2997.14849 3001.14849
-CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 37.54956 47.54956
-NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 38.74910 48.74910
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
30 2498.29408 2502.29408
+CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 35.13518 45.13518
+NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 36.17043 46.17043
The model from the data pipe 'CR72 - relax_disp (Mon Feb 17 18:00:16 2014)'
has been selected.
The spin cluster [':66@N'].
-# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
31 1129.05612 1133.05612
-CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 15.81233 25.81233
-NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 15.79713 25.79713
-The model from the data pipe 'NS CPMG 2-site expanded - relax_disp (Mon Feb
17 18:00:16 2014)' has been selected.
+# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
30 962.74016 966.74016
+CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 15.02929 25.02929
+NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 15.08439 25.08439
+The model from the data pipe 'CR72 - relax_disp (Mon Feb 17 18:00:16 2014)'
has been selected.
The spin cluster [':67@N'].
# Data pipe
Num_params_(k) Num_data_sets_(n) Chi2 Criterion
-No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
31 18252.93240 18256.93240
-CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 120.14948 130.14948
-NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
31 113.41542 123.41542
+No Rex - relax_disp (Mon Feb 17 18:00:16 2014) 2
30 16773.20431 16777.20431
+CR72 - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 118.17857 128.17857
+NS CPMG 2-site expanded - relax_disp (Mon Feb 17 18:00:16 2014) 5
30 111.56710 121.56710
The model from the data pipe 'NS CPMG 2-site expanded - relax_disp (Mon Feb
17 18:00:16 2014)' has been selected.
\end{lstlisting}
@@ -3522,14 +3522,15 @@
\midrule
-Non-clustered & 40 & 248 & 418.011 & 498.011 \\
+Non-clustered & 40 & 240 & 388.966 & 468.966 \\
Clustered & 26 & 240 & 510.966 & 562.966 \\
\bottomrule
\end{tabular}
\end{center}
-As the Akaike Information Criterion value is much less for the non-clustered
analysis, then this result is the most parsimonious (the closest to Occam's
razor as defined in frequentist statistics).
+The Akaike Information Criterion value is much less for the non-clustered
analysis.
+Therefore this result is the most parsimonious -- the result closest to
Occam's razor as defined by frequentist statistics.
Therefore the non-clustered analysis is a statistically better description
of the experimental data for this set of residues.
-For a different spin cluster, this result might be different.
+For a different cluster of spins, the result may be different.
If the assumptions of the same dynamics for all spins (both populations
$\pA$ and exchange rates $\kex$) is correct, the results of the clustered
analysis are nevertheless useful as it can decrease parameter uncertainty.
r22319 - /trunk/docs/latex/dispersion.tex