Re: [bug #14941] Final Run error message -- December 14, 2009 - 17:53

Hi Mikaela,

I've added truncated versions of your files to the relax test suite
which include only the first 2 residues.  I've also randomised the
relaxation data.  This will prevent the bug from ever returning (once
I fix it).  I hope you don't mind me including this.

Cheers,

Edward



2009/12/14 anonymous <NO-REPLY.INVALID-ADDRESS@xxxxxxx>:
> URL:
>  <http://gna.org/bugs/?14941>
>
>                 Summary: Final Run error message
>                 Project: relax
>            Submitted by: None
>            Submitted on: Monday 12/14/2009 at 16:57 CET
>                Category: None
>                Severity: 3 - Normal
>                Priority: 5 - Normal
>                  Status: None
>                 Privacy: Public
>             Assigned to: None
>         Originator Name:
>        Originator Email: mikaela.stewart@xxxxxxxxx
>             Open/Closed: Open
>         Discussion Lock: Any
>                 Release: 1.3.3
>        Operating System: GNU/Linux
>
>    _______________________________________________________
>
> Details:
>
> I originally reported this under support not realizing it was a bug.  I am
> running relax using the full_analysis.py script and after running all of the
> models until they converged I tried to run "final" to pick the best model 
> and
> do monte-carlo simulations and I get the following traceback...
>
> relax> monte_carlo.setup(number=200)
>
> relax> monte_carlo.create_data(method='back_calc')
> Traceback (most recent call last):
>  File "/usr/local/bin/relax", line 418, in ?
>    Relax()
>  File "/usr/local/bin/relax", line 127, in __init__
>    self.interpreter.run(self.script_file)
>  File "/usr/local/relax-1.3.3/relax-1.3/prompt/interpreter.py", line 273, in
> run
>    elif hasattr(self.relax, 'dummy_mode'):
>  File "/usr/local/relax-1.3.3/relax-1.3/prompt/interpreter.py", line 534, in
> run_script
>    def runcode(self, code):
>  File "/usr/local/relax-1.3.3/relax-1.3/prompt/interpreter.py", line 430, in
> interact_script
>    except KeyboardInterrupt:
>  File "full_analysis_test.py", line 668, in ?
>    Main(self.relax)
>  File "full_analysis_test.py", line 368, in __init__
>    monte_carlo.create_data()
>  File "/usr/local/relax-1.3.3/relax-1.3/prompt/monte_carlo.py", line 91, in
> create_data
>    monte_carlo.create_data(method=method)
>  File "/usr/local/relax-1.3.3/relax-1.3/generic_fns/monte_carlo.py", line
> 76, in create_data
>    data = create_mc_data(data_index)
>  File "/usr/local/relax-1.3.3/relax-1.3/specific_fns/model_free/main.py",
> line 508, in create_mc_data
>    valid_types = ['mf_orig', 'mf_ext', 'mf_ext2']
>  File
> "/usr/local/relax-1.3.3/relax-1.3/specific_fns/model_free/mf_minimise.py",
> line 61, in back_calc
>    value = self.minimise(min_algor='back_calc', min_options=(index,
> ri_label, frq_label, frq))
>  File
> "/usr/local/relax-1.3.3/relax-1.3/specific_fns/model_free/mf_minimise.py",
> line 773, in minimise
>    if not spin.model:
> AttributeError: 'SpinContainer' object has no attribute 'model'
>
>
>
> I am attaching my results files for "local_tm/aic" and "sphere/opt" in that
> order.  I still get the error message if I run the script using only these
> two files. Thank you very much for your help with this.
>
>
>
>    _______________________________________________________
>
> File Attachments:
>
>
> -------------------------------------------------------
> Date: Monday 12/14/2009 at 16:57 CET  Name: results.bz2  Size: 8kB   By: 
> None
>
> <http://gna.org/bugs/download.php?file_id=7499>
> -------------------------------------------------------
> Date: Monday 12/14/2009 at 16:57 CET  Name: results.bz2  Size: 18kB   By:
> None
>
> <http://gna.org/bugs/download.php?file_id=7500>
>
>    _______________________________________________________
>
> Reply to this item at:
>
>  <http://gna.org/bugs/?14941>
>
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