On 24 February 2010 06:04, <michael.bieri@xxxxxx> wrote:
Author: michaelbieri
Date: Wed Feb 24 06:04:55 2010
New Revision: 10899
URL: http://svn.gna.org/viewcvs/relax?rev=10899&view=rev
Log:
Function to assemble NOE data was added to auto_noe.py.
Modified:
branches/bieri_gui/gui_bieri/analyses/auto_noe.py
Modified: branches/bieri_gui/gui_bieri/analyses/auto_noe.py
URL:
http://svn.gna.org/viewcvs/relax/branches/bieri_gui/gui_bieri/analyses/auto_noe.py?rev=10899&r1=10898&r2=10899&view=diff
==============================================================================
--- branches/bieri_gui/gui_bieri/analyses/auto_noe.py (original)
+++ branches/bieri_gui/gui_bieri/analyses/auto_noe.py Wed Feb 24 06:04:55
2010
@@ -343,7 +343,7 @@
def assemble_data(self):
- """Assemble the data required for the Relax_fit class.
+ """Assemble the data required for the Auto_noe class.
See the docstring for auto_analyses.relax_fit for details. All
data is taken from the relax data store, so data upload from the GUI to
there must have been previously performed.
@@ -354,16 +354,19 @@
# The data container.
data = Container()
- # The sequence data (file name, dir, mol_name_col, res_num_col,
res_name_col, spin_num_col, spin_name_col, sep). These are the arguments
to the sequence.read() user function, for more information please see the
documentation for that function.
- data.seq_args = ['fixme!', None, None, 2, 3, 4, 5, None]
-
- # The file names and relaxation times.
- for i in range(len(self.data.file_list)):
- # Hit the end of the list.
- if self.data.file_list[i] == '':
- break
- data.file_names = self.data.file_list[:i]
- data.relax_times = self.data.relax_times[:i]
+ # Reference peak list and background noe.
I'm guessing that "background noe" is actually the baseplane RMSD? It
may not seem important, but for those non-coders who come later and
read this code, fixing the comment will be useful for them.
Cheers,
Edward
Re: r10899 - /branches/bieri_gui/gui_bieri/analyses/auto_noe.py