Re: r10901 - /branches/bieri_gui/gui_bieri/analyses/auto_noe.py -- February 24, 2010 - 18:57

Hi,

Here I would prefer the class name Noe_calc as this fits better with
the class naming convention.  This new module should be added to the
1.3 line, as the web interface will be using it (when that development
starts).

Cheers,

Edward




On 24 February 2010 06:09,  <michael.bieri@xxxxxx> wrote:
> Author: michaelbieri
> Date: Wed Feb 24 06:09:15 2010
> New Revision: 10901
>
> URL: http://svn.gna.org/viewcvs/relax?rev=10901&view=rev
> Log:
> The function execute_thread() originally copied from auto_rx_base.py was 
> adapted to execute NOE analysis.
>
>
>
> Modified:
>    branches/bieri_gui/gui_bieri/analyses/auto_noe.py
>
> Modified: branches/bieri_gui/gui_bieri/analyses/auto_noe.py
> URL: 
> http://svn.gna.org/viewcvs/relax/branches/bieri_gui/gui_bieri/analyses/auto_noe.py?rev=10901&r1=10900&r2=10901&view=diff
> ==============================================================================
> --- branches/bieri_gui/gui_bieri/analyses/auto_noe.py (original)
> +++ branches/bieri_gui/gui_bieri/analyses/auto_noe.py Wed Feb 24 06:09:15 
> 2010
> @@ -495,7 +495,7 @@
>         sys.stderr = redir
>
>         # Print a header in the controller.
> -        header = 'Starting %s calculation' % self.label
> +        header = 'Starting NOE calculation'
>         underline = '-' * len(header)
>         wx.CallAfter(self.gui.controller.log_panel.AppendText, 
> (header+'\n\n'))
>         time.sleep(0.5)
> @@ -504,7 +504,7 @@
>         data = self.assemble_data()
>
>         # Execute.
> -        Relax_fit(seq_args=data.seq_args, file_names=data.file_names, 
> relax_times=data.relax_times, int_method=data.int_method, 
> mc_num=data.mc_num, pdb_file = data.structure_file, unresolved = 
> data.unresolved)
> +        NOE_calc(pipe_name='noe', noe_ref = data.ref_file, noe_ref_rmsd = 
> data.ref_rmsd, noe_sat = data.sat_file, noe_sat_rmsd = data.sat_rmsd, freq 
> = data.frq, unresolved = data.unresolved, pdb_file = data.structure_file, 
> results_folder = data.save_dir, int_method='height', mc_num=500)
>
>
>     def link_data(self, data):
>
>
> _______________________________________________
> relax (http://nmr-relax.com)
>
> This is the relax-commits mailing list
> relax-commits@xxxxxxx
>
> To unsubscribe from this list, get a password
> reminder, or change your subscription options,
> visit the list information page at
> https://mail.gna.org/listinfo/relax-commits