Re: r11106 - /branches/bieri_gui/gui_bieri/analyses/auto_rx_base.py -- April 27, 2010 - 16:31

Hi,

I'm not sure what should be done in the first version of the GUI.  In
the future, having a dialog/wizard which gives full access to the
sequence.read() user function would remove the need for global
settings.  Maybe this dialog/wizard could be built anyway and used to
fill out the data in data.seq_args?  It just needs a dialog with a
file selection button, and some text entries for specifying the
columns needed and the column separator (e.g. ',' for csv files from
MS Excel).  What do you think?

Regards,

Edward


On 22 April 2010 05:58,  <michael.bieri@xxxxxxxxxxxxx> wrote:
> Author: michaelbieri
> Date: Thu Apr 22 05:58:36 2010
> New Revision: 11106
>
> URL: http://svn.gna.org/viewcvs/relax?rev=11106&view=rev
> Log:
> Sequence file is imported  for Rx calculations.
>
> The sequence file should be a list of residues in the first column of the 
> file. We could add a settings text box to change the location of the 
> sequence.
>
> Modified:
>    branches/bieri_gui/gui_bieri/analyses/auto_rx_base.py
>
> Modified: branches/bieri_gui/gui_bieri/analyses/auto_rx_base.py
> URL: 
> http://svn.gna.org/viewcvs/relax/branches/bieri_gui/gui_bieri/analyses/auto_rx_base.py?rev=11106&r1=11105&r2=11106&view=diff
> ==============================================================================
> --- branches/bieri_gui/gui_bieri/analyses/auto_rx_base.py (original)
> +++ branches/bieri_gui/gui_bieri/analyses/auto_rx_base.py Thu Apr 22 
> 05:58:36 2010
> @@ -250,7 +250,7 @@
>         data = Container()
>
>         # The sequence data (file name, dir, mol_name_col, res_num_col, 
> res_name_col, spin_num_col, spin_name_col, sep).  These are the arguments 
> to the  sequence.read() user function, for more information please see the 
> documentation for that function.
> -        data.seq_args = ['fixme!', None, None, 2, 3, 4, 5, None]
> +        data.seq_args = [ds.relax_gui.sequencefile, None, None, 1, None, 
> None, None, None]
>
>         # The file names and relaxation times.
>         for i in range(len(self.data.file_list)):
>
>
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