Hi,
Have a look at the file:
test_suite/shared_data/model_free/OMP/final_results_trunc_1.2.bz2
This can be opened in OpenOffice, Excel, etc by saying whitespace
delimited. Is this what you are after? This was part of the
results.write() user function before I switched it to XML. This
columnar formatted file could be reintroduced though - the code is
always sitting there in the repository - if you have a purpose for it
in the GUI. In any case, this code belongs in the generic_fns package
in relax rather than the gui_bieri package, as it is not GUI related.
Cheers,
Edward
On 23 April 2010 05:40, <michael.bieri@xxxxxxxxxxxxx> wrote:
Author: michaelbieri
Date: Fri Apr 23 05:40:29 2010
New Revision: 11142
URL: http://svn.gna.org/viewcvs/relax?rev=11142&view=rev
Log:
relaxGUI generates a CSV file with the major parameters after final
model-free analysis.
The .csv fle is a default Excel and OpenOffice file format and is opened by
these programs.
Modified:
branches/bieri_gui/gui_bieri/analyses/results_analysis.py
Modified: branches/bieri_gui/gui_bieri/analyses/results_analysis.py
URL:
http://svn.gna.org/viewcvs/relax/branches/bieri_gui/gui_bieri/analyses/results_analysis.py?rev=11142&r1=11141&r2=11142&view=diff
==============================================================================
--- branches/bieri_gui/gui_bieri/analyses/results_analysis.py (original)
+++ branches/bieri_gui/gui_bieri/analyses/results_analysis.py Fri Apr 23
05:40:29 2010
@@ -92,11 +92,11 @@
te = []
#create file
- file = open(str(directory) + sep + 'Model-free_Results.txt', 'w')
+ file = open(str(directory) + sep + 'Model-free_Results.csv', 'w')
file.write('Data Extraction by relaxGUI, (C) 2009 Michael Bieri')
file.write("\n")
file.write("\n")
- "self.file.write(""Residue\t\tModel\tS2\t\t\tRex
[1/s]\t\tTe\t\t\tRelaxation Parameters\n"")"
+
"self.file.write(""Residue;Model;S2;Rex_[1/s];Te;Relaxation_Parameters\n"")"
file.write("\n")
#loop over residues
@@ -114,7 +114,7 @@
# The model-free model.
if hasattr(spin, 'model'):
spin.model = spin.model[1:2]
- file.write("\t\t" + spin.model)
+ file.write(";" + spin.model)
model.append(spin.model)
# S2.
@@ -122,10 +122,10 @@
s2 = str(spin.s2)
s2_err = str(spin.s2_err)
if spin.s2 == None:
- file.write("")
+ file.write(";")
s2.appen('')
else:
- file.write("\t" + s2[0:5]+ " +/- " + s2_err[0:4])
+ file.write(";" + s2[0:5]+ " +/- " + s2_err[0:4])
s2.appen(s2[0:5]+ " +/- " + s2_err[0:4])
# Rex.
@@ -133,33 +133,33 @@
rex = str(spin.rex)
rex_err = str(spin.rex_err)
if spin.rex == None:
- file.write("\t\t\t")
+ file.write(";")
rex.appen('')
else:
rex_eff = spin.rex * (int(spin.frq_labels[1]) * 1000000 * 2
* 3.14159)**2
rex = str(rex_eff)
rex_err_eff = spin.rex_err * (int(spin.frq_labels[1]) *
1000000 * 2 * 3.14159)**2
rex_err = str(rex_err_eff)
- file.write("\t\t" + rex[0:5]+ " +/- " + rex_err[0:4])
+ file.write(";" + rex[0:5]+ " +/- " + rex_err[0:4])
rex.appen(rex[0:5]+ " +/- " + rex_err[0:4])
# Te
if hasattr(spin, 'te'):
if spin.te == None:
- file.write("\t\t")
+ file.write(";")
te.appen('')
else:
te_ps = spin.te * 1e-12
te = str(te_ps)
te_err = str(spin.te_err)
- file.write("\t\t" + te[0:5]+ " +/- " + te_err[0:4])
+ file.write(";" + te[0:5]+ " +/- " + te_err[0:4])
te.appen(te[0:5]+ " +/- " + te_err[0:4])
# Parameters.
if hasattr(spin, 'params'):
- file.write("\t\t\t" + str(spin.params[0:len(spin.params)]))
+ file.write(";" + str(spin.params[0:len(spin.params)]))
else:
- file.write("\\n")
+ file.write(";\n")
continue
# Start a new line.
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Re: r11142 - /branches/bieri_gui/gui_bieri/analyses/results_analysis.py