Edward Thank you for your response. I did the scons clean_all and that worked. I was able to do the relax --info and I am going to paste it in this email. Do the curve fitting module need to be recompiled? Thank you Luca relax 1.3.10 Molecular dynamics by NMR data analysis Copyright (C) 2001-2006 Edward d'Auvergne Copyright (C) 2006-2011 the relax development team This is free software which you are welcome to modify and redistribute under the conditions of the GNU General Public License (GPL). This program, including all modules, is licensed under the GPL and comes with absolutely no warranty. For details type 'GPL' within the relax prompt. Assistance in using the relax prompt and scripting interface can be accessed by typing 'help' within the prompt. ImportError: relaxation curve fitting is unavailable, the corresponding C modules have not been compiled. Hardware information: Machine: i686 Processor: System information: System: Linux Release: 2.6.32-33-generic Version: #70-Ubuntu SMP Thu Jul 7 21:09:46 UTC 2011 GNU/Linux version: Ubuntu 10.04 lucid Distribution: Ubuntu 10.04 lucid Full platform string: Linux-2.6.32-33-generic-i686-with-Ubuntu-10.04-lucid Software information: Architecture: 32bit ELF Python version: 2.6.5 Python branch: tags/r265 Python build: r265:79063, Apr 16 2010 13:09:56 Python compiler: GCC 4.4.3 Python implementation: CPython Python revision: 79063 Numpy version: 1.3.0 Libc version: glibc 2.4 Python packages (most are optional): Package Installed Version Path minfx True Unknown /usr/local/relax/minfx bmrblib False numpy True 1.3.0 /usr/lib/python2.6/dist-packages/numpy ScientificPython False wxPython True mpi4py False epydoc False optparse True 1.5.3 /usr/lib/python2.6/optparse.pyc Numeric False readline True /usr/lib/python2.6/lib-dynload/readline.so profile True /usr/lib/python2.6/profile.pyc bz2 True /usr/lib/python2.6/lib-dynload/bz2.so gzip True /usr/lib/python2.6/gzip.pyc os.devnull True /usr/lib/python2.6/os.pyc Compiled relax C modules: Relaxation curve fitting: False Luca Leone BMP Network Administrator Department of Biochemistry & Molecular Pharmacology University of Massachusetts Medical School (508) 856-8301 phone (508) 335-5335 cell luca.leone@xxxxxxxxxxxx ________________________________________ From: Edward d'Auvergne [edward.dauvergne@xxxxxxxxx] Sent: Tuesday, July 12, 2011 5:05 PM To: Luca Leone Cc: Leone, Luca; relax-devel@xxxxxxx Subject: Re: [sr #2770] relax setup issue Dear Luca Leone, Welcome to the relax mailing lists. Would you be able to add the output of: $ relax --info to your support request (http://gna.org/support/?2770)? Cheers. This additional information will help to work out what the issue could be. It is most likely to be the compiled C modules. If that command does not work, try typing: $ scons clean_all $ relax and see if that works. This command is dangerous as it will delete the relaxation curve-fitting compiled C module located at maths_fns/relax_fit.so (if scons is not installed, just manually delete that file). If you need this curve-fitting, then you'll need to compile this module. For this there are instructions at http://www.nmr-relax.com/download.html#Source_code_release (you'll need the python development files installed, a C compiler, and scons). Alternatively the problem could be with one of the python packages installed on your computer, but it's better to assume the relax C modules are at fault first. I hope this helps. Regards, Edward On 12 July 2011 21:30, Luca Leone <NO-REPLY.INVALID-ADDRESS@xxxxxxx> wrote:
URL: <http://gna.org/support/?2770> Summary: relax setup issue Project: relax Submitted by: leone76 Submitted on: Tue 12 Jul 2011 07:30:46 PM GMT Category: None Priority: 5 - Normal Severity: 4 - Important Status: None Privacy: Public Assigned to: None Originator Email: Open/Closed: Open Discussion Lock: Any Operating System: GNU/Linux _______________________________________________________ Details: To whom it may concern I am trying to install relax on ubuntu 11 and when I try to run the test I get an error "Segmentation Fault" I would appreciate any help. Thank you _______________________________________________________ Reply to this item at: <http://gna.org/support/?2770> _______________________________________________ Message sent via/by Gna! http://gna.org/ _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list relax-devel@xxxxxxx To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel